Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 915 a.a., DNA polymerase I from Pseudomonas sp. BP01

 Score = 1088 bits (2814), Expect = 0.0
 Identities = 558/932 (59%), Positives = 707/932 (75%), Gaps = 26/932 (2%)

Query: 8   PLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGK 67
           PL+L+DGSSYLYRAFHA P   ++  +PT A+ GV+NM++S+ +Q+     AV+FDAKG 
Sbjct: 5   PLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFDAKGG 64

Query: 68  TFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQ 127
           TFRD M+ +YKA+RP MPD+LR QVEPLH  ++A+G PLL +EGVEADDVIGTLAR A+ 
Sbjct: 65  TFRDAMFAEYKANRPSMPDDLRVQVEPLHASVKALGYPLLCVEGVEADDVIGTLARSAAA 124

Query: 128 AGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKV 187
            G PV+ISTGDKDMAQLVD +ITL+NTMT  VLD  GV EKFG+ PE IID+LALMGDKV
Sbjct: 125 QGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALMGDKV 184

Query: 188 DNIPGVPGVGEKTATALLQGIGG-LEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLS 246
           DNIPGVPGVGEKTA  LL GIGG L  LYANLDK+ AL  RG+KT+  KLEE+R  A LS
Sbjct: 185 DNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDAAFLS 244

Query: 247 YQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVTADEQTK 306
           Y+LATIK DV L+     L+   PDR+AL +LY ++ FKSW+ E        V  D    
Sbjct: 245 YELATIKVDVPLDVEVDALVCGEPDREALQALYTEMEFKSWVAE--------VQRD---- 292

Query: 307 TSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFDTETDNL 366
                 +  A    A  E PAA ++  +Y+TIL++  F  WLEKL+QA LFAFDTET  L
Sbjct: 293 ------AARAGEDVAPVEEPAAKVE-PKYETILDQARFDAWLEKLRQAPLFAFDTETTGL 345

Query: 367 DYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKAKVGQNL 426
           D   A LVG+SFAVA  EAAY+P+AHDY  AP QL+R+ V+  LKPLLED +KAKVGQN 
Sbjct: 346 DAQKAQLVGLSFAVAPHEAAYVPLAHDYEGAPAQLDRETVLLALKPLLEDPAKAKVGQNA 405

Query: 427 KYDASVMARYG--VELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFEQVAGK 484
           KYD +++A     +E+RG+ +DTML+SYV NS   +HDMDSLA ++L H+ I+FE +AGK
Sbjct: 406 KYDINILANGSPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLGHTTIAFEDIAGK 465

Query: 485 GKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVPVLSR 544
           G  QLTFNQI L++A  YAAEDAD+TLRLHQ +   + Q   ++ V  +IEMPLVPVL++
Sbjct: 466 GTKQLTFNQIHLDKAGPYAAEDADITLRLHQALQARLAQTPSVQPVLTDIEMPLVPVLAK 525

Query: 545 IERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQMKLPVL 604
           IER G ++D  LL  QS E+ +++ +LE  AYELAG+ FNL SPKQL +IL++++ +PVL
Sbjct: 526 IERQGALVDAALLHIQSGELGVKMAELELRAYELAGEEFNLGSPKQLGSILYDKLGMPVL 585

Query: 605 QKTPSGTPSTNEEVLQELAL-DYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTGRVHTS 663
            KT  G PST E VL ELAL  YPLP+VL++YR L+KLKSTYTDKLP  INP TGR+HTS
Sbjct: 586 SKTAKGQPSTAEAVLDELALLGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTS 645

Query: 664 YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMAHLS 723
           Y QAV ATGRLSS+DPNLQNIP+R  EGRRIRQAF+A  G+K++A DYSQIELRIMAHL+
Sbjct: 646 YQQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLA 705

Query: 724 GDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLG 783
            D+ LL AFR+  D+H ATAAE+  V ++ V+++QRR+AKA+NFGLIYGMSAFGLAKQ+G
Sbjct: 706 KDEGLLHAFRNDLDVHRATAAEVFSVALEDVTTDQRRKAKAINFGLIYGMSAFGLAKQIG 765

Query: 784 IPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMRRKA 843
           + R ++Q+Y+D+YF RYPGV+ YME TR++AA+ G+VET+FGRRL+LP+I ++N   RK 
Sbjct: 766 VDRKQSQDYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKG 825

Query: 844 AERAAINAPMQGTAADIIKKAMLLVDEWIEREG-DGRVKLLMQVHDELVFEVKESSLSEI 902
           AER AINAPMQGTAADIIK+AM+ VD W+   G D RV  ++QVHDELV EV+E  + ++
Sbjct: 826 AERTAINAPMQGTAADIIKRAMVNVDNWLSESGLDARV--ILQVHDELVLEVREDLVQQV 883

Query: 903 ESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           + +++Q M  AA+L VPL+ EAG G NW++AH
Sbjct: 884 KDEIRQYMSQAAQLDVPLLVEAGIGANWDEAH 915