Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 937 a.a., DNA polymerase I from Phaeobacter inhibens DSM 17395

 Score =  725 bits (1871), Expect = 0.0
 Identities = 408/951 (42%), Positives = 592/951 (62%), Gaps = 50/951 (5%)

Query: 9   LILIDGSSYLYRAFHAYPG-TMSNGEIPTNAIYGVVNMIRSMMR----QFASDRMAVIFD 63
           L LIDGS++++RA+HA P  T  +  +P  A+ G  NM+   +       A   +AVIFD
Sbjct: 12  LHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGPDAPTHVAVIFD 71

Query: 64  AKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLAR 123
               TFR+++YDQYKA+R  MP++LR Q+        A  +     EG EADD+I TLA 
Sbjct: 72  KGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEQEGFEADDIIATLAC 131

Query: 124 QASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALM 183
           QA  AG  V I + DKD+ QLV   + +++ M N  +D +GV EKFG+ P+ ++D  AL 
Sbjct: 132 QARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDTDGVFEKFGVGPDRVVDVQALA 191

Query: 184 GDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNA 243
           GD VDN+PG PG+G KTA  L+   G LE L    ++I     R      Q L ENR   
Sbjct: 192 GDSVDNVPGAPGIGIKTAALLINEYGSLEDLLNRAEEIKQPKRR------QTLIENRAQI 245

Query: 244 KLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDG----GTGIV 299
           +LS QL  +  ++EL+ +   L  + PD D L+S   ++ F++    + D        IV
Sbjct: 246 ELSKQLVQLDNNMELDFTLDDLGVRDPDADHLLSFLAEMEFRTLSKRVADQLGKEAPAIV 305

Query: 300 TADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAF 359
            A  Q        ST    AA + + P    D S Y+ + +    + W+ ++++    A 
Sbjct: 306 DAPAQ--------STDTAEAATVADMP---FDSSSYECVRDAGALKKWVIQIRERGWVAV 354

Query: 360 DTETDNLDYMVANLVGMSFAVAEGEAAYLPVAH------------DYLDAPQQLERDWVI 407
           DTET   D MV +LVG+S  V  G A Y+P+ H            D  D    L+    +
Sbjct: 355 DTETTGFDEMVVDLVGISLCVEPGRACYIPLTHKSGSSDDLFGSDDLADGQMPLQD--AL 412

Query: 408 AQLKPLLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLA 467
             LKP+LED S  K+GQN+KYDA + AR G+++  I  DTML SY  ++    H MD+L+
Sbjct: 413 DLLKPVLEDNSILKIGQNMKYDAKIFARRGIDVAPI-DDTMLMSYAMHAGQHGHGMDTLS 471

Query: 468 LRFLQHSCISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKL 527
            R+L H+ I  + + G GK+ +TF+++ +++A  YAAEDAD+TLRL Q   P + Q   +
Sbjct: 472 ERYLNHTPIPIKPLLGTGKSAITFDRVPIDDAVAYAAEDADITLRLWQLFKPQLHQSG-V 530

Query: 528 EQVYREIEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSS 587
             VY  +E PLVPVL+R+ER G+ +D   LS  S   A ++  LE   +ELAGQ FN+ S
Sbjct: 531 TTVYETLERPLVPVLARMEREGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGQNFNVGS 590

Query: 588 PKQLQTILFEQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTD 647
           PKQL  ILF+++ +   +K  +G  +T  ++L++LA ++ LP +++++R L+KLKSTYTD
Sbjct: 591 PKQLGEILFDKLGMEGGKKGKTGAYATGADILEDLATEHALPGLVLDWRQLSKLKSTYTD 650

Query: 648 KLPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIM 707
            L   IN  TGRVHTSY Q    TGRL+STDPNLQNIP+R+EEGRRIR+AFV   G  ++
Sbjct: 651 ALQDHINAETGRVHTSYVQTGANTGRLASTDPNLQNIPIRSEEGRRIREAFVPEEGNVLL 710

Query: 708 AVDYSQIELRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNF 767
           A+DYSQIELRI+AH++G   L  AF +G+DIHA TA+E+  VP+++++S+ RR+AKA+NF
Sbjct: 711 ALDYSQIELRILAHVAGIDTLKQAFAEGQDIHALTASEMFNVPLEEMTSDIRRQAKAINF 770

Query: 768 GLIYGMSAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRR 827
           G+IYG+S FGLA+ L IPR EAQ ++D+YFER+PG+ +YM++T + A + G+V+T+FGR+
Sbjct: 771 GVIYGISGFGLARNLRIPRAEAQGFIDRYFERFPGIRRYMDETVAFAKEHGHVQTLFGRK 830

Query: 828 LHLPEITSRNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVH 887
           +H PEI+++   R   A+RAAINAP+QGTAAD+I++AM+ +   I        ++L+QVH
Sbjct: 831 IHTPEISAKGP-RAGFAKRAAINAPIQGTAADVIRRAMIRMPAAIAHL---PARMLLQVH 886

Query: 888 DELVFEVKESSLSEIESKVQQLMESAAE----LAVPLVAEAGHGDNWEQAH 934
           DEL+FEV E+++ +      Q+ME+AA+    L V LV +AG G NW +AH
Sbjct: 887 DELLFEVPEAAVEDTIETASQVMETAADPAVHLDVKLVVDAGRGQNWAEAH 937