Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (312), Expect = 5e-33
 Identities = 82/253 (32%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 7   NPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKG 66
           N  ++IDG + + R   A P       +P      V +  R ++ +     + +++D   
Sbjct: 2   NRFLIIDGLNLVRRIHAAQPNENDVNGLPER----VTSACRKLLSKHNPSHVTLVWDGDA 57

Query: 67  KTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGV-EADDVIGTLARQA 125
            ++R ++YD YK  R PMP+ L   +  L Q +   G    +I+ + EADDVI TLA + 
Sbjct: 58  ISWRKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFH--SIDAIAEADDVIATLASKM 115

Query: 126 SQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGD 185
            QA    +I + DK   QL+   I L +      +  E    + G+     ID+LA+ GD
Sbjct: 116 VQAKGEAIIVSTDKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGD 175

Query: 186 KVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKL 245
             + IPG+PG+G K+A  LL+    L  +YA+LDKI A         A+KLEE R  A+L
Sbjct: 176 SGNKIPGIPGIGPKSACELLKTFRTLANVYASLDKIGA-------KQAKKLEEGRALARL 228

Query: 246 SYQLATIKCDVEL 258
           SY+L  ++ D+ L
Sbjct: 229 SYKLVQLQTDIPL 241