Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 868 a.a., DNA polymerase I from Marinobacter adhaerens HP15

 Score =  972 bits (2513), Expect = 0.0
 Identities = 490/893 (54%), Positives = 656/893 (73%), Gaps = 25/893 (2%)

Query: 42  VVNMIRSMMRQFASDRMAVIFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRA 101
           +++M+R + + F   +M V+FDAKGKTFR ++Y++YKA+RPPMP++L CQ+EP+H++++A
Sbjct: 1   MISMLRRLEQDFPGSKMVVVFDAKGKTFRHDLYEEYKANRPPMPEDLACQIEPIHEIVKA 60

Query: 102 MGLPLLAIEGVEADDVIGTLARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLD 161
           MGLPLL + GVEADDVIGTLA +A+  G+ V++STGDKDMAQLV D++TLINTMT   +D
Sbjct: 61  MGLPLLTVTGVEADDVIGTLANEATSKGIDVVVSTGDKDMAQLVSDHVTLINTMTETRMD 120

Query: 162 REGVIEKFGIPPELIIDYLALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKI 221
           R+GV+EKFG+ PE I+DYLAL+GDKVDNIPGV   G KTA   LQ    L+ +  + D+I
Sbjct: 121 RDGVVEKFGVTPEQIVDYLALVGDKVDNIPGVNKCGPKTAVKWLQSYDNLDNVIEHADEI 180

Query: 222 AALGFRGSKTMAQKLEENRGNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGK 281
                     + + L +      LS +LATI+ DVEL+   + L  +  D   L+ L+ +
Sbjct: 181 KG-------KIGEYLRDATETLPLSRELATIRTDVELDFGLEDLKLREQDDQQLLELFRE 233

Query: 282 LAFKSWLTELLDGGTGIVTADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNE 341
             F+SW+ EL +        DE         S+++++A A  E+P        Y  I ++
Sbjct: 234 YEFRSWIAELEE--------DE---------SSSSSNARAGDETPKPETGEKDYSIITDQ 276

Query: 342 QDFQLWLEKLKQAELFAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQL 401
           ++   WLE+L  AELFAFDTET +L YM A +VG+SFAV  GEAAY+P+ HDY+ AP+QL
Sbjct: 277 KELDQWLERLGAAELFAFDTETTSLRYMDAEIVGVSFAVKPGEAAYVPLGHDYMGAPEQL 336

Query: 402 ERDWVIAQLKPLLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKH 461
           +RD V+ QLKPLLE+   AKVGQNLKYD +V+A +G+ L GI  DTML+SYV NSV  +H
Sbjct: 337 DRDQVLDQLKPLLENPDLAKVGQNLKYDKNVLANHGITLEGIAEDTMLESYVLNSVATRH 396

Query: 462 DMDSLALRFLQHSCISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLI 521
           DMDSLA+ +L     SFE +AGKG  QLTFNQI LE+AA YAAEDAD+TLRLHQ + P +
Sbjct: 397 DMDSLAMYYLGEKTTSFESIAGKGAKQLTFNQIDLEKAAPYAAEDADITLRLHQTLRPKL 456

Query: 522 EQDAKLEQVYREIEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQ 581
           ++  KL  VY +I++PLVPVLSR+E+ G +I    L   SQE+A R+ +LE+ A+E+AG+
Sbjct: 457 KETGKLAAVYEDIDLPLVPVLSRMEQRGTLISASTLRQHSQELAERMAELEKEAHEVAGE 516

Query: 582 PFNLSSPKQLQTILFEQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKL 641
            FNL S KQLQ I +++M LPV++K             +    +    +V++E+R L+KL
Sbjct: 517 TFNLGSTKQLQAIFYDKMGLPVIKKPQRARRQQRSRCFRNSPTNTNC-RVILEHRSLSKL 575

Query: 642 KSTYTDKLPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAP 701
           KSTYTD LP++I+  TGRVHTSYHQAVTATGRLSS++PNLQNIP+R+E+GRRIRQAF+AP
Sbjct: 576 KSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQNIPIRSEQGRRIRQAFIAP 635

Query: 702 HGWKIMAVDYSQIELRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRR 761
            G+K++A DYSQIELRIMAHLSGD+ LL AF  G+DIH ATA+E+ GV +D VSS+QRR 
Sbjct: 636 EGYKLVAADYSQIELRIMAHLSGDKGLLKAFEKGEDIHKATASEVFGVSLDDVSSDQRRS 695

Query: 762 AKAVNFGLIYGMSAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVE 821
           AKA+NFGLIYGMSAFGL++QL + R  AQEY+D+YFERYPGV++YM++ R +A   G+VE
Sbjct: 696 AKAINFGLIYGMSAFGLSRQLDVERKLAQEYIDRYFERYPGVLKYMDNIRKQAHDDGFVE 755

Query: 822 TIFGRRLHLPEITSRNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVK 881
           T+FGRRL+LPEI +RN   ++AAER AINAPMQGTAADIIK+AM+ V+ W+ +E     +
Sbjct: 756 TLFGRRLYLPEINARNKQLQQAAERTAINAPMQGTAADIIKRAMVDVENWLLKEHADEAR 815

Query: 882 LLMQVHDELVFEVKESSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           + MQVHDEL+ EVKES+L +I S +++ M +AAEL VPL+ EAG GDNW++AH
Sbjct: 816 MTMQVHDELILEVKESALDKIRSGLEKRMSAAAELDVPLLVEAGVGDNWDEAH 868