Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 924 a.a., DNA polymerase I from Lysobacter sp. OAE881

 Score =  924 bits (2389), Expect = 0.0
 Identities = 497/936 (53%), Positives = 643/936 (68%), Gaps = 21/936 (2%)

Query: 6   DNP-LILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDA 64
           D P L+LIDGSSYLYRAFHA P   ++   PT A++GVVNM+R+ +++  +  +A + DA
Sbjct: 3   DTPRLVLIDGSSYLYRAFHALPPLTNDAGEPTGALFGVVNMLRATLKEQPA-YVAFVVDA 61

Query: 65  KGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQ 124
            GKTFRD++Y +YKA+R  MPDELR QV+P+  ++ A+G+ +L IEGVEADDVIGTLA +
Sbjct: 62  PGKTFRDDLYPEYKANRAAMPDELRAQVQPMCDIVNALGMTILRIEGVEADDVIGTLAVR 121

Query: 125 ASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDRE-GVIEKFGIPPELIIDYLALM 183
           A+  G+ V IST DKD AQLV   I L+NTM+   LD E GVI+KFG+ P+ IID LALM
Sbjct: 122 AADQGIDVTISTSDKDFAQLVRPGIALVNTMSGSRLDSEAGVIDKFGVRPDQIIDLLALM 181

Query: 184 GDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNA 243
           GD VDNIPGV   G KTA   L   G L+ + A+ + I        +    +L  NR   
Sbjct: 182 GDSVDNIPGVEKCGPKTAAKWLGEYGTLDNVIAHAESIKGKIGENLRAALPRLPLNR--- 238

Query: 244 KLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVTADE 303
                L TI+ DV+L+  P  L  +    D L  LY +  FK  L EL   G G V  D 
Sbjct: 239 ----TLTTIRTDVDLDRGPTDLALRDRHVDELRELYARYGFKQALREL--EGPGAVVEDH 292

Query: 304 QTKTSSVTVSTAATHAAAIPESPAAHIDRS-----QYQTILNEQDFQLWLEKLKQAELFA 358
               + +  +TAA HA +   +PA  +D S      Y+ IL  + F   L +L+ +E FA
Sbjct: 293 ANSPTGLR-NTAAGHARS--GAPAEAVDPSLSAKGDYEAILTPEQFDDLLARLRDSEEFA 349

Query: 359 FDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDES 418
           FDTETD+LD M ANL+G+S A   G  AYLP+ HDY  AP+QL+R   +A L+ L ED +
Sbjct: 350 FDTETDSLDPMQANLIGLSLAAEPGRGAYLPLGHDYPGAPKQLDRTEALAALRTLFEDPT 409

Query: 419 KAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISF 478
           + K+GQ+ KYD  V+ R G+E+R    DTMLQS+VYN+   +HDMDSLA R+L +  + +
Sbjct: 410 RKKMGQHGKYDLHVLRRNGIEVRNYADDTMLQSFVYNATATRHDMDSLAKRYLGYDTVRY 469

Query: 479 EQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPL 538
           E VAGKG   + F+Q+++E+A +YAAEDADVTLRLH+ + P +E    L  VY EIEMPL
Sbjct: 470 EDVAGKGAKSIPFSQVSIEDAMRYAAEDADVTLRLHRVLSPKVEAVPGLAHVYHEIEMPL 529

Query: 539 VPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQ 598
           V VL R+E  GVM+D   L  QS ++  R+   +Q A ELAG+ FNL SPKQL  +LF++
Sbjct: 530 VQVLERVEANGVMVDADELRRQSADLGKRMLAAQQKATELAGRTFNLDSPKQLGQLLFDE 589

Query: 599 MKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTG 658
           +KLP L KTPSG PSTNEE L+ +A  + LP+V++EYRGL+KL+STYTDKLP+M+N  TG
Sbjct: 590 LKLPALVKTPSGAPSTNEEALEAIADQHELPRVILEYRGLSKLRSTYTDKLPEMVNRDTG 649

Query: 659 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRI 718
           RVHTSYHQA  ATGRL+S+DPNLQNIP+R ++GRRIRQAFVAP G  I+A DYSQIELRI
Sbjct: 650 RVHTSYHQAGAATGRLASSDPNLQNIPIRTDDGRRIRQAFVAPEGRCIVACDYSQIELRI 709

Query: 719 MAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGL 778
           MAHLS D +LL AF  G DIH ATAAE+ G P D+VS+ +RR AKA+NFGL+YGM AFGL
Sbjct: 710 MAHLSEDPSLLRAFESGADIHRATAAEVFGKPFDEVSNNERRAAKAINFGLMYGMGAFGL 769

Query: 779 AKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNA 838
           A+QL I RGEAQ+Y+  YF RYPGV  +ME TR +A + GYVET+FGRRL+L  I +RN 
Sbjct: 770 ARQLNISRGEAQDYIALYFSRYPGVRDFMERTRQQAREQGYVETVFGRRLYLDNIHARNQ 829

Query: 839 MRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESS 898
             R  AERAAINAPMQGTAADIIK AM+ +D W+    D R  +++QVHDELVFEV+   
Sbjct: 830 GLRAGAERAAINAPMQGTAADIIKLAMISIDGWLADHRD-RALMVLQVHDELVFEVETGF 888

Query: 899 LSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           +  + ++ +  M   A L VPL+ ++G G NW++AH
Sbjct: 889 VDTLVNEARDRMSRVAGLRVPLLVDSGIGANWDEAH 924