Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 963 a.a., DNA polymerase I from Caulobacter crescentus NA1000

 Score =  752 bits (1942), Expect = 0.0
 Identities = 424/950 (44%), Positives = 589/950 (62%), Gaps = 34/950 (3%)

Query: 9   LILIDGSSYLYRAFHAYPG-TMSNGEIPTNAIYGVVNMIRSMMRQFASD---RMAVIFDA 64
           L L+DGS+YL+RA+HA P  T  +  +P  A+ G  NM+  ++R    D    +AVI+D 
Sbjct: 24  LFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQGFCNMLWKLLRDMQGDTPTHLAVIWDH 83

Query: 65  KGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQ 124
             KTFR+ +YDQYKAHRPP P++L  Q   + +   A G+P + + G EADD+I   A +
Sbjct: 84  SEKTFRNALYDQYKAHRPPPPEDLIPQFPLVREATLAFGVPAIELPGYEADDLIAAYACK 143

Query: 125 ASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMG 184
           A   G   +I + DKD+ QLV D +++ + M  V ++RE V EKFG+ PE ++D  AL G
Sbjct: 144 ARDIGGEAIIVSSDKDLMQLVGDGVSMYDPMKGVRIEREQVFEKFGVYPEKVVDVQALCG 203

Query: 185 DKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAK 244
           D VDN+PG PG+G KTA  L+   G L+ L A   +I     R      + L       +
Sbjct: 204 DSVDNVPGAPGIGIKTAAQLITEYGDLDTLLARAGEIKQPKRR------ETLINFADQIR 257

Query: 245 LSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIV----- 299
           LS  L  + CD  L +    L  + PD++AL +   ++ F+S    + DG          
Sbjct: 258 LSRALVKLDCDTPLPQPLDALTVREPDKEALAAFLEQMEFRSLARRVGDGSAAATPGTLD 317

Query: 300 --TADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELF 357
              A  +    SV+   AA  AAA P  P   ID + Y  + +    + W+ K     L 
Sbjct: 318 RPAAPPKAPVVSVSYMGAAARAAAHPVEPVK-IDHAAYACVRDLATLKAWVAKATDKGLV 376

Query: 358 AFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAH----DYL--DAPQQLER---DWVIA 408
           AFDTETD L    A L G+S A+A GEA Y+P++H    D L  +AP  +E+     VIA
Sbjct: 377 AFDTETDALSSATAGLCGVSLAIAPGEACYIPISHCEKADGLAFEAPADIEQIPLADVIA 436

Query: 409 QLKPLLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLAL 468
            LKPLLED +  KV QN KYD +V+AR+G+++  I  DTML SYV  +    H MD L+ 
Sbjct: 437 TLKPLLEDPAVLKVAQNAKYDIAVLARHGIQVAPIE-DTMLISYVLEAGLHGHGMDELSE 495

Query: 469 RFLQHSCISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLE 528
             L H  I F+QVAG GK Q++F  +AL EA  YAAEDADVTLRL+  + P + + A L 
Sbjct: 496 LHLGHKPIPFKQVAGSGKGQISFKHVALPEATAYAAEDADVTLRLYHHLKPQLAR-ASLS 554

Query: 529 QVYREIEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSP 588
            VY  +E P+  VL+ +E  GV +D   L   S E +LR+ Q E  A EL G+PFNL SP
Sbjct: 555 TVYETLERPMPAVLAMMENNGVRVDPEALRLLSNEFSLRMAQFEARAQELVGRPFNLGSP 614

Query: 589 KQLQTILFEQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDK 648
           KQ+  +LF +M++   +KT +G  ST+ +VL+ LAL++ LP+VL+++R L+KLK TYT+ 
Sbjct: 615 KQIGDVLFGEMQMKGGKKTATGQWSTDSDVLESLALEHELPRVLLDWRQLSKLKGTYTEN 674

Query: 649 LPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMA 708
           L   I PSTGRVHTSY  A T TGRLSS+DPNLQNIPVR EEGR+IR+AFVA  G  +++
Sbjct: 675 LIAAIAPSTGRVHTSYALAATTTGRLSSSDPNLQNIPVRTEEGRKIRKAFVAAPGHVLIS 734

Query: 709 VDYSQIELRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFG 768
            DYSQIELR++AH+     L  AF++G DIHA TA+E+   PI+ +    RRRAKA+NFG
Sbjct: 735 ADYSQIELRLLAHIGDIPQLKKAFQEGLDIHAMTASEMFDTPIEGMDPMIRRRAKAINFG 794

Query: 769 LIYGMSAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRL 828
           ++YG+SAFGLA QLGI +GEA  Y+  YFER+PG+  YM+ T++   + GYV TIFGR++
Sbjct: 795 IVYGISAFGLANQLGISQGEAGAYIKTYFERFPGIQAYMDATKAFVREHGYVTTIFGRKI 854

Query: 829 HLPEITSRNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHD 888
           ++P+I +++A  R+ AERAAINAP+QG AAD++++AM+ +   +E  G    ++L+QVHD
Sbjct: 855 NIPDIEAKSAAHRQFAERAAINAPIQGAAADVMRRAMIRMPVALEAAGLS-TRMLLQVHD 913

Query: 889 ELVFEVKESSLSEIESKVQQLMESAAE----LAVPLVAEAGHGDNWEQAH 934
           ELVFE  E+      + V+ +ME AAE    L++PL  EA    NW++AH
Sbjct: 914 ELVFEAPEAEAERACAVVRAVMEKAAEPAVALSIPLTVEARAASNWDEAH 963