Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 937 a.a., DNA polymerase I from Ralstonia sp. UNC404CL21Col

 Score =  976 bits (2524), Expect = 0.0
 Identities = 506/939 (53%), Positives = 655/939 (69%), Gaps = 22/939 (2%)

Query: 9   LILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGKT 68
           L+L+DGSSYLYRA+HA P   +    PT AIYG+VNM+R +   + +   A IFDAKGKT
Sbjct: 8   LLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACIFDAKGKT 67

Query: 69  FRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQA 128
           FRD++Y  YK HR PMPD+LR Q+EP+H+ +RA+G P+L IEGVEADDVIGTLA +A++ 
Sbjct: 68  FRDDLYPAYKEHRAPMPDDLRAQIEPIHEAVRALGWPILVIEGVEADDVIGTLAERAARE 127

Query: 129 GMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKVD 188
           G+  ++STGDKD+AQLV+D++TL+NTMTN  LD  GV  KFG+PPE I+DYL+L+GD VD
Sbjct: 128 GVRTIVSTGDKDLAQLVNDHVTLVNTMTNETLDPAGVQAKFGVPPERIVDYLSLIGDTVD 187

Query: 189 NIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLSYQ 248
           N+PGVP VG KTA   L   G L+ + A   +I  +     +   + L + R       +
Sbjct: 188 NVPGVPKVGPKTAVKWLTEFGSLDNVIARAGEIKGVVGDNLRNTLEWLPKGR-------E 240

Query: 249 LATIKCDVELEESPQT---LLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVTADEQT 305
           L T+K D +L +   T   L+    D+  L+  + +  FK+WL E          +    
Sbjct: 241 LLTVKLDCDLSKEVPTFDALIDGGEDKSKLVDFFSRYGFKTWLREASGDALPDTRSVGAA 300

Query: 306 KTSSVTVSTAATHAAAIPESP-----AAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFD 360
           + ++  V   A  AA +          A  D  QY+T+  E   + W+++L + +L   D
Sbjct: 301 RRAATPVKNYAGEAAQLQAQANLFDVEAPPDEIQYETVTTEAQLESWMQRLDEVDLVCID 360

Query: 361 TETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDY-----LDAPQQLERDWVIAQLKPLLE 415
           TET ++D M+A LVG+S +V  GEA Y+PVAH       LDA  QL RD V+A++K  LE
Sbjct: 361 TETTSIDPMLAQLVGISLSVKPGEACYIPVAHRGPDVAGLDAAAQLSRDTVLARMKLWLE 420

Query: 416 DESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSC 475
           DES+ KVGQ+LKYDA V+A +G+ LRGI HDTML+SYV  S    H MD+LA R L    
Sbjct: 421 DESRKKVGQHLKYDAHVLANHGIALRGIEHDTMLESYVLES-HRNHGMDALAERVLHLKT 479

Query: 476 ISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIE 535
           I++E V GKG +Q+ F+++ L+ A +YAAEDAD+TLRLH+ + P + +D KL  VY +IE
Sbjct: 480 ITYESVCGKGASQIGFDEVPLDRATEYAAEDADITLRLHRTLFPKVSEDDKLRYVYEQIE 539

Query: 536 MPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTIL 595
           MP   VL ++ER GV+ID   L+ QS E+ LRL  LE  A++LAGQPFNL SPKQ+  I 
Sbjct: 540 MPTSIVLQKMERNGVLIDAERLAKQSNELGLRLIDLEAEAHKLAGQPFNLGSPKQIGDIF 599

Query: 596 FEQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINP 655
           F QMKLP+++KT SG PST+EEVLQ+LA DYPLPK+L++YRGLAKLKSTYTDKLPKM+NP
Sbjct: 600 FNQMKLPIIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMVNP 659

Query: 656 STGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIE 715
            TGRVHT+Y QA   TGRL+STDPNLQNIPVR EEGRRIR+AF+AP G  I++ DYSQIE
Sbjct: 660 RTGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAPEGSVIVSADYSQIE 719

Query: 716 LRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSA 775
           LRIMAHLS D+ L+ AFR+G+D+H ATAAE+  V   +V+ +QRR AK +NFGLIYGMSA
Sbjct: 720 LRIMAHLSQDEGLMRAFREGQDVHRATAAEVFNVTPLEVTPDQRRVAKVINFGLIYGMSA 779

Query: 776 FGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITS 835
           FGLA  LGI R  A+ Y+D+YF RYPG   YM++TR  A + GYVET+FGRRL LP+I  
Sbjct: 780 FGLASNLGIGRDAAKLYIDRYFARYPGAASYMDETRQSARERGYVETVFGRRLWLPDING 839

Query: 836 RNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVK 895
            N  RR+AAERAAINAPMQGTAAD+IK +ML V  W+E E   R +L+MQVHDELV EV 
Sbjct: 840 GNGPRRQAAERAAINAPMQGTAADLIKLSMLAVQGWLEAEA-MRSRLVMQVHDELVLEVP 898

Query: 896 ESSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           +  L+ +  ++ +LM S A L VPLVAE G G NWE+AH
Sbjct: 899 QDELAVVRERLPELMCSVATLRVPLVAEVGVGANWEEAH 937