Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 913 a.a., DNA polymerase-1 from Paraburkholderia graminis OAS925

 Score =  977 bits (2525), Expect = 0.0
 Identities = 514/933 (55%), Positives = 665/933 (71%), Gaps = 38/933 (4%)

Query: 9   LILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGKT 68
           L+L+DGSSYLYRA+HA P        PT A+YG++NM+R M ++  ++  A +FDAKGKT
Sbjct: 12  LLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMINMLRRMRKEVTAEYSACVFDAKGKT 71

Query: 69  FRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQA 128
           FRD+ Y  YKA+RP MPD+L  Q+EP+H  +RA+G PLL I+GVEADDVIGTL+ +A + 
Sbjct: 72  FRDDWYPDYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDVIGTLSTEAEKR 131

Query: 129 GMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKVD 188
           GM V++STGDKD+AQLV D++TLINTMTN  LDR GV+ KFG+PPE I+DYL+L+GD VD
Sbjct: 132 GMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDRAGVLAKFGVPPERIVDYLSLIGDTVD 191

Query: 189 NIPGVPGVGEKTATALLQGIGGLEALYANLDKI-AALGFRGSKT-----MAQKLEENRGN 242
           N+PGV   G KTA   L     L+ + A+ D+I  A+G    +      MA+KL     N
Sbjct: 192 NVPGVEKCGPKTALKWLTQYESLDGIVAHADEIKGAVGDNLRRALDFLPMARKLVTVERN 251

Query: 243 AKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVTAD 302
             L+  +A+I+         + L  +   R+ L  ++ +  FK+WL E+      I  A 
Sbjct: 252 CDLTEHIASIE---------ENLQSRPESREELRDVFTRHGFKTWLREV-----EIADAV 297

Query: 303 EQTKTSSVTVSTAATHAAAIPESPAAHIDRSQ-YQTILNEQDFQLWLEKLKQAELFAFDT 361
           E  +T              +P  PA  +D  + Y+T+   + F  WL+K+  AE+ +FDT
Sbjct: 298 EGPETD-------------VP--PALTVDHERHYETVQTWEQFDAWLQKINTAEITSFDT 342

Query: 362 ETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKAK 421
           ET +LD MVA +VG+SF+V  G AAY+PVAH   DAP QL RD V+A+LKP LE     K
Sbjct: 343 ETTSLDPMVAQIVGLSFSVEAGHAAYVPVAHRGPDAPVQLPRDEVLAKLKPWLESAEHKK 402

Query: 422 VGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFEQV 481
           VGQ+LKYD  V+A YG+E+RG+ HDT+LQSYV  S    HDMD+LALR L    I +E V
Sbjct: 403 VGQHLKYDEQVLANYGIEMRGVEHDTLLQSYVLES-HRPHDMDNLALRHLGIKTIKYEDV 461

Query: 482 AGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVPV 541
           AGKG  Q+ F+++AL++AA+YAAEDAD+TLRLHQ ++P +  +  LE VYR+IE+P   V
Sbjct: 462 AGKGAQQIGFDEVALDKAAEYAAEDADITLRLHQTLYPQLAAEETLEHVYRDIEVPTSRV 521

Query: 542 LSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQMKL 601
           L ++ER+GV+ID   L  QS EIA RL QLE  AY LAG  FNL SPKQ+  I FE+++L
Sbjct: 522 LRKMERSGVLIDAEKLRQQSSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFERLEL 581

Query: 602 PVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTGRVH 661
           PV++KTPSG PST+EEVLQ+LA DYPLPK+L+E+RGL+KLKSTYTDKLP+M+N STGRVH
Sbjct: 582 PVVKKTPSGAPSTDEEVLQKLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNASTGRVH 641

Query: 662 TSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMAH 721
           T+Y QAV  TGRL+S DPNLQNIPVR  EGRRIR+AF+AP G K+++ DYSQIELRIMAH
Sbjct: 642 TNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRIMAH 701

Query: 722 LSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQ 781
           +SGD++LL AF +G+DIH ATAAEI  V   +VS++QRR AK +NFGLIYGMS+FGLA  
Sbjct: 702 ISGDESLLRAFSEGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASN 761

Query: 782 LGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMRR 841
           LGI R  A+ Y+D+YF RYPGV +YM++TR  A   GYVET+FGRRL LPEI   N  RR
Sbjct: 762 LGITRDAAKLYIDRYFARYPGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNGPRR 821

Query: 842 KAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSLSE 901
           +AAERAAINAPMQGTAAD+IK +M+ V +WIE    G  +++MQVHDEL+ EV +  LS+
Sbjct: 822 QAAERAAINAPMQGTAADLIKLSMIAVQKWIEESNIG-TRMIMQVHDELILEVPDEELSD 880

Query: 902 IESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           +  ++ +LM   A L VPLVAE G G NWE+AH
Sbjct: 881 VRKRLPELMCGVAALKVPLVAEVGAGLNWEEAH 913