Pairwise Alignments

Query, 255 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., hydrolase, TatD family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  138 bits (348), Expect = 1e-37
 Identities = 80/255 (31%), Positives = 141/255 (55%), Gaps = 7/255 (2%)

Query: 1   MIDTHAHVYASEFDHDR---DEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDLCH 57
           +ID+H H+   +   D+   + ++A A+  G++ +L  N+       M      +  +  
Sbjct: 2   LIDSHCHLDRLKAAPDQPTLELILANAKARGVDYMLCVNVRQQGFESMRDKVAGFEQVFL 61

Query: 58  SMMGLHPCYVDANVKQTLATIYEWFSRHTFIAVGEIGIDLYWDKTFKAEQEMAFLTQLNW 117
           S  G+HP  +D      +  I  +      +A+GE G+D ++    K+ Q+  F  Q+  
Sbjct: 62  SS-GVHP--LDVKEGLDVEQIRRFAMEPKVVAIGETGLDYFYADETKSLQQQCFEQQIAL 118

Query: 118 AKELDLPVVIHTRDSLNETLALLKQAQDGRLRGVFHCFGGSVDEAKAINDLGFHLGIGGV 177
           A E++ P+++HTRD+  +T+ +LK  Q  ++ GV HCF  + + AKA  DLGF++ + G+
Sbjct: 119 AVEVNKPLIVHTRDAREDTINMLKTGQAEKVGGVLHCFTENWEMAKAAIDLGFYISVSGI 178

Query: 178 STFKNSG-MDQVIPQLDLNYVILETDCPYLAPVPHRGKRNEPMLTHLISEKVAQLRSLPL 236
            TFKN+G +  VI ++    +++ETD PYLAP+PHRG+ N+P     ++E VA+LR    
Sbjct: 179 VTFKNAGELRTVIRKVPKERLLVETDSPYLAPIPHRGQENQPAYVRDVAEFVAELRGERY 238

Query: 237 GEVIKITNNNSKALF 251
            ++ + T+ N   LF
Sbjct: 239 EDLAQYTSENFFNLF 253