Pairwise Alignments

Query, 255 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  208 bits (530), Expect = 8e-59
 Identities = 104/257 (40%), Positives = 158/257 (61%), Gaps = 2/257 (0%)

Query: 1   MIDTHAHVYASEFDHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDLCHSMM 60
           +IDTH+H++  EF  D  +V+ RARQ G+ +I MPNID  +I PML+    YPD C+ M+
Sbjct: 2   LIDTHSHLFLEEFSDDLPQVMERARQAGVSRIYMPNIDSTTIEPMLSVCADYPDFCYPMI 61

Query: 61  GLHPCYVDANVKQTLATIYEWF-SRHTFIAVGEIGIDLYWDKTFKAEQEMAFLTQLNWAK 119
           GLHP  V+ + +Q L+ + E   + + F+A+GEIG+DLYWDKTF  EQ   F  Q+ WA 
Sbjct: 62  GLHPTSVNESYRQELSIVRERLEAPNNFVAIGEIGLDLYWDKTFLNEQLYVFEKQIEWAL 121

Query: 120 ELDLPVVIHTRDSLNETLALLKQAQDGRLRGVFHCFGGSVDEAKAINDL-GFHLGIGGVS 178
           E  LP+V+H+R++ +    +++  ++  L G+FH F G+ +EA  + +  GF LGI GV 
Sbjct: 122 EYKLPIVVHSREAFDYIYKVMEPYKNTALTGIFHSFTGNAEEAARLLEFGGFMLGINGVV 181

Query: 179 TFKNSGMDQVIPQLDLNYVILETDCPYLAPVPHRGKRNEPMLTHLISEKVAQLRSLPLGE 238
           TFK S +   +  + L  ++LETD PYL P P+RGKRNE         K+ ++       
Sbjct: 182 TFKKSSLPDTLLTVPLERIVLETDSPYLTPAPNRGKRNESANVRDTFLKLVEIYRTTPEH 241

Query: 239 VIKITNNNSKALFGLDK 255
           + + T+ N+  +FG+ K
Sbjct: 242 LSQATSENALKVFGMVK 258