Pairwise Alignments

Query, 277 a.a., rhomboid family intramembrane serine protease GlpG from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Uncharacterized membrane protein (homolog of Drosophila rhomboid) from Pseudomonas stutzeri RCH2

 Score =  102 bits (255), Expect = 7e-27
 Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 19/239 (7%)

Query: 44  DQHIETAQAELALFLENPYAEKYQAASWEVADQKRPQFHYASPNLLSLIKAKAGVFTLFI 103
           DQ +     E+   + + YA         V +Q R +  + +    S + A   V TL +
Sbjct: 38  DQQVLRVPVEVVEQVRDLYARHPHGDDSVVIEQPRRRGGFVAALRASPLTAAVLVITLVV 97

Query: 104 MALCIIIFTLQTFG---------AGDEVFNALHFPALAGQQWQIWRWVSHALLHFSVMHI 154
            A+ ++     T            G+  + A     LA  QW  WR ++   +HF ++H+
Sbjct: 98  AAITMLGENFATIRWLNFVDFRIDGEYAYFASLEQTLAAGQW--WRLITPIFVHFGILHL 155

Query: 155 AFNLLWWWQFGGDLEQRLGSVRLIKLFVVSAIISGAGQYWVEGAN-FGGLSGVVYALAGY 213
           A N +W+W+ G  +E    +  L+ L ++  ++S   QY   G   FGGLSGV+Y L G+
Sbjct: 156 AMNSMWFWELGRRIEALQRAWMLLALTLLFGLVSNFAQYLFGGPGIFGGLSGVLYGLLGH 215

Query: 214 LWILGQRAPQLGLSIPRSLMGFMLIWLVL---GYVQPF----MAIANTAHLAGLISGVV 265
            W+  + AP     +P  ++  ML+WLV+   G ++      +AIAN AH+ GL++G V
Sbjct: 216 CWLYQKLAPNEAYRLPPGVVVLMLVWLVICLTGVIEVLSFGALAIANAAHVGGLVAGCV 274