Pairwise Alignments

Query, 277 a.a., rhomboid family intramembrane serine protease GlpG from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 68/269 (25%), Positives = 108/269 (40%), Gaps = 40/269 (14%)

Query: 20  MAAHHIEIQMMPDAGGQFTLW--------VIQDQHIETAQAELALFLENPYAEKYQAASW 71
           M    IEI + P   G   +W        V+Q   +  A AEL          K    +W
Sbjct: 85  MQEFEIEIDVCPSCRG---VWLDKHECDKVVQSPRVRQALAELD--------GKISVKTW 133

Query: 72  EVADQKRPQFHYASPNLLSLIKAKAGVFTLFIMALCIIIFTLQTFGAG--DEVFNALHF- 128
                   QF    P   +L      V T +++ L ++IF +  F     D +F      
Sbjct: 134 LF------QFLSQMPVEFNLKPKTKPVVTWWLLGLNLVIFGIYGFDLSMIDPIFEQFALV 187

Query: 129 PALAGQQWQIWRWVSHALLHFSVMHIAFNLLWWWQFGGDLEQRLGSVRLIKLFVVSAIIS 188
           P        +W   SH  LH  ++H+A N+ + +  G +LE  LG  R + L++V  + +
Sbjct: 188 PNQVMHGSHVWTLFSHMFLHGDIIHLAGNMYFLYVVGDNLEDALGRARFLGLYLVCGLAA 247

Query: 189 GAGQYWVEGAN---FGGLSGVVYALAGYLWILGQRAPQLGLSI-----PRSLMGFMLIWL 240
            A Q   E  +     G SG +  L G +++L  R   L           S + F  IWL
Sbjct: 248 AAAQIISEPGSDIYMVGASGAIAGLFG-MYLLWFRYASLTFMFIVFQKKVSPLVFFGIWL 306

Query: 241 VLGYVQPFMA---IANTAHLAGLISGVVL 266
            L     +MA   +A  AH+ G ++G+++
Sbjct: 307 ALNIFGLYMAGEGVAYWAHIGGFVAGLII 335