Pairwise Alignments

Query, 277 a.a., rhomboid family intramembrane serine protease GlpG from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., rhomboid family protein (RefSeq) from Shewanella loihica PV-4

 Score =  209 bits (531), Expect = 7e-59
 Identities = 113/270 (41%), Positives = 160/270 (59%), Gaps = 7/270 (2%)

Query: 9   NPRAAQAFIDYMAAHHIEIQMMPDAGGQFTLWVIQDQHIETAQAELALFLENPYAEKYQA 68
           N RAAQA IDY+    I+ Q+     G   L+V ++Q    A+ E   F+ NPY +KY  
Sbjct: 9   NERAAQALIDYLKGQGIDCQLQHAEHGVI-LYVAREQDYAKARREYEHFVRNPYDDKYLQ 67

Query: 69  ASWEVADQKRPQFHYASPNL--LSLIKAKAGVFTLFIMALCIIIFTLQTFGAGDEVFNAL 126
           ASWE       +  Y +P L  ++   + AG  TL +M  C +I+    FG  + +F AL
Sbjct: 68  ASWENGSTGT-KLDYGAPGLQLMTQFLSGAGPLTLIVMLSCTLIYLGFIFGFANPIFEAL 126

Query: 127 HF-PALAGQQW-QIWRWVSHALLHFSVMHIAFNLLWWWQFGGDLEQRLGSVRLIKLFVVS 184
            F  A+ G    QIWR  + +L+HFS MHI FNLLWWW  GG +E +LG   L+ L +++
Sbjct: 127 SFFAAVPGSDTSQIWRVFTPSLMHFSAMHIIFNLLWWWYLGGKIENKLGVTPLLTLLLIA 186

Query: 185 AIISGAGQYWVEGANFGGLSGVVYALAGYLWILGQRAPQLGLSIPRSLMGFMLIWLVLGY 244
             +    QY + G NFGGLSGVVYA+ GY WI+G R P+ G+ +P + +GFML+WLV G+
Sbjct: 187 GTLPNLLQYAIGGPNFGGLSGVVYAVVGYTWIMGVRRPEKGIGLPPAYIGFMLVWLVFGF 246

Query: 245 VQPF-MAIANTAHLAGLISGVVLAWFDSQR 273
              F ++IAN AH+ GL+ G+   + DS+R
Sbjct: 247 TDMFGLSIANGAHVGGLMVGLAQGFIDSRR 276