Pairwise Alignments

Query, 277 a.a., rhomboid family intramembrane serine protease GlpG from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., rhomboid family protein (RefSeq) from Shewanella loihica PV-4

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 26/262 (9%)

Query: 20  MAAHHIEIQMMPDAGGQFTLWVIQDQHIETAQAELALFLENPYAEKYQAASWEVADQKRP 79
           MA + IE+ +     G   +W+ + +  +  Q+     L           +W        
Sbjct: 83  MAGYEIEVDLCHGCSG---IWIDEHERTKVVQSPKVRQLLEELNGSISVKTWLF------ 133

Query: 80  QFHYASPNLLSLIKAKAGVFTLFIMALCIIIFTLQTFGAG--DEVFNALHFPA---LAGQ 134
           QF    P   +L      + T  ++AL I+IF    F     D VF      +   LAG 
Sbjct: 134 QFLSKMPVEFNLKPKSTPLVTYLLLALNILIFFAYGFNLSTTDMVFENFAMRSNDLLAGH 193

Query: 135 QWQIWRWVSHALLHFSVMHIAFNLLWWWQFGGDLEQRLGSVRLIKLFVVSAIISGAGQYW 194
               W  VSH  LH  +MH+A N+ + +  G +LE  LG  +   L+++  + + A Q  
Sbjct: 194 H--PWSLVSHMFLHGDIMHLAGNMYFLYVVGDNLEDVLGRTKFFALYLLCGLAAAAAQIA 251

Query: 195 VE---GANFGGLSGVVYALAG--YLWILGQRAPQLGLSIPRSL--MGFMLIWL---VLGY 244
            +   G    G SG +  L G   +W        + +   + L  M F  IWL   + G 
Sbjct: 252 ADPGSGIYMVGASGAIAGLFGMYLMWFRHASLTFMFVVFQKKLSPMAFFAIWLGFNIFGL 311

Query: 245 VQPFMAIANTAHLAGLISGVVL 266
           V     +A  AH+ G + G++L
Sbjct: 312 VMAGQGVAYWAHIGGFVMGLIL 333