Pairwise Alignments

Query, 277 a.a., rhomboid family intramembrane serine protease GlpG from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., glpG protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  228 bits (581), Expect = 1e-64
 Identities = 120/269 (44%), Positives = 164/269 (60%), Gaps = 7/269 (2%)

Query: 9   NPRAAQAFIDYMAAHHIEIQMMPDAGGQFTLWVIQDQHIETAQAELALFLENPYAEKYQA 68
           N RAAQAF+DY+    I+ Q+ P   G   L V+++Q +E A+ E A F+ +PY  KY  
Sbjct: 9   NSRAAQAFVDYLKGERIDCQIQPLPQGVAIL-VLREQDVEQARKEFAHFIAHPYDNKYLQ 67

Query: 69  ASWEVADQKRPQFHYASPNLLSLIK--AKAGVFTLFIMALCIIIFTLQTFGAGDEVFNAL 126
           ASWE  D    +  Y +P+L    +    AG  TL I  LC +I+     G    V+ AL
Sbjct: 68  ASWEHGDTNA-KLDYGAPSLQLFTQFITGAGPITLIIFGLCTLIYAAMNLGFASPVYQAL 126

Query: 127 -HFPALAGQQW-QIWRWVSHALLHFSVMHIAFNLLWWWQFGGDLEQRLGSVRLIKLFVVS 184
            +F A+ G    Q WR  + +LLHFS MHI FNLLWWW  GG +E R+G+  L+ L +V+
Sbjct: 127 SYFGAVPGTGVSQFWRVFTPSLLHFSAMHIIFNLLWWWYLGGKIETRIGTAPLLILLLVA 186

Query: 185 AIISGAGQYWVEGANFGGLSGVVYALAGYLWILGQRAPQLGLSIPRSLMGFMLIWLVLGY 244
             +    QY+V G NFGGLSGVVYA+AGY W++G R P+ G+ +P S MGFMLIWL LG+
Sbjct: 187 GTLPNVVQYYVSGPNFGGLSGVVYAVAGYTWVMGLRKPEAGIGLPPSYMGFMLIWLALGF 246

Query: 245 VQPF-MAIANTAHLAGLISGVVLAWFDSQ 272
                +++AN AH+ GL+ G+   WFDS+
Sbjct: 247 TDFLGISVANGAHIGGLLIGLAQGWFDSR 275