Pairwise Alignments

Query, 277 a.a., rhomboid family intramembrane serine protease GlpG from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., rhomboid family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 63.9 bits (154), Expect = 7e-15
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 28/229 (12%)

Query: 54  LALFLENPYAEKYQAASWEVADQKRPQFHYASPNLLSLIKAKAG-VFTLFIMALCIIIFT 112
           L L L+   A K  AA   +   K   + +     L+  K + G V T  ++ +  +IF 
Sbjct: 291 LMLKLDETQASKPMAAQLSMEKPKAELYGF-----LAEFKPRQGFVITPILLYINTLIFV 345

Query: 113 LQTFGAGDEVFNALHFPALAGQQW-----------QIWRWVSHALLHFSVMHIAFNLLWW 161
           L  F +     + +  P      W           Q+WR +S+  LH  +MH+ FNL   
Sbjct: 346 LMAFVSQ----HVIALPNSVLLDWGANLRQLVLEQQVWRLISNVFLHGGLMHLVFNLYGL 401

Query: 162 WQFGGDLEQRLGSVRLIKLFVVSAII-SGAGQYWVEGANFGGLSGVVYALAGYL--WI-L 217
           +  G  LE  LG  RL+ +++   ++ S A   W E     G SG +  L G L  WI L
Sbjct: 402 FFAGMFLEPLLGKWRLLWVYLCCGLVASMASIGWYEATISIGASGAIMGLFGVLIIWIWL 461

Query: 218 GQRAPQLGLSIPRSLMGFMLIWLVLGYVQPFMAIANTAHLAGLISGVVL 266
           G       + +  +L  F+   LV+G    F  + N AHL GL SG++L
Sbjct: 462 GLLPLADNMPLALNLTLFVTASLVMGL---FGGVDNAAHLGGLGSGLLL 507