Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Xanthomonas campestris pv. campestris strain 8004

 Score =  298 bits (764), Expect = 4e-85
 Identities = 164/309 (53%), Positives = 227/309 (73%), Gaps = 3/309 (0%)

Query: 303 VNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAA 362
           + E+ +++ A++ GDL+A++    +G FA + +  +  +  L  I+ DI   A TI+ A+
Sbjct: 399 LGELSQLLKAIADGDLTARMHGNQQGVFARMRDDANATVQRLTDIVGDITLAAQTIRTAS 458

Query: 363 TEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGG 422
            EI+ GN DL+ RTEQQA+NLE+TA+SMEEL STVRQN+D A QA+  A  A +IA  GG
Sbjct: 459 AEIAAGNADLAQRTEQQAANLEETAASMEELTSTVRQNADTAQQASRGAQAAADIAGRGG 518

Query: 423 ELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAS 482
           +++  VV TM  I  S++KIA+II VIDGIAFQTNILALNAAVEAARAGEQGRGF+VVAS
Sbjct: 519 DMVGSVVETMGEIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 578

Query: 483 EVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIAS 542
           EVR+LAQRSA AAK++K LI  SV  +  G+  V+++G TM+ IV S+++V  L+A+I++
Sbjct: 579 EVRALAQRSAGAAKEVKHLIDASVDSVERGSARVEQAGQTMQQIVQSVQQVTTLIAEISA 638

Query: 543 ASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQD 602
           AS EQ++GI +V + VN MDE TQ+NAALVEEA+AA+ ++  QA +L + V++FRL   D
Sbjct: 639 ASREQSSGIEQVARTVNDMDETTQRNAALVEEASAAARAMEEQAVELSEAVSVFRL---D 695

Query: 603 TSAPSLLKA 611
              P L+ A
Sbjct: 696 ARRPRLVAA 704



 Score = 40.0 bits (92), Expect = 4e-07
 Identities = 57/304 (18%), Positives = 119/304 (39%), Gaps = 44/304 (14%)

Query: 306 VKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEI 365
           V R   ++++GDL+A+       E   LG+ ++Q + TL                   ++
Sbjct: 221 VARAARSVAAGDLAARAVIGNRDEIGLLGQAMTQVVSTL------------------ADV 262

Query: 366 SNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANI-LAGKATEIAASGGEL 424
           S+   D++ R E    +    A +       +  +++  + A + L G   ++       
Sbjct: 263 SSAQADMAQRHEAGEMSYRMDADAFPGAYGRMVGDTNGLVGAQVGLIGDMLQVMQH--YA 320

Query: 425 IEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALN----AAVEAARAGEQGRGFSVV 480
           +  + V M  +     +I + +        + N+ A+N      VEAA AG+     +  
Sbjct: 321 VGDMSVDMPRLPGEKARITEAMDTT-----KHNLAAINGEIRGLVEAAAAGDFATRGNAQ 375

Query: 481 ASE-------------VRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIV 527
           A +             + ++       ++ +KA+    ++   +GN+          D  
Sbjct: 376 AYQFEFRGMVDGLNGLMHNVDHNLGELSQLLKAIADGDLTARMHGNQ-QGVFARMRDDAN 434

Query: 528 VSIKRVHDLMADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAE 587
            +++R+ D++ DI  A+    T   E+      + + T+Q AA +EE AA+ E L +   
Sbjct: 435 ATVQRLTDIVGDITLAAQTIRTASAEIAAGNADLAQRTEQQAANLEETAASMEELTSTVR 494

Query: 588 QLYD 591
           Q  D
Sbjct: 495 QNAD 498