Pairwise Alignments
Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 654 a.a., Methyl-accepting chemotaxis protein from Xanthomonas campestris pv. campestris strain 8004
Score = 334 bits (857), Expect = 7e-96
Identities = 197/541 (36%), Positives = 299/541 (55%), Gaps = 46/541 (8%)
Query: 58 SDLTPQVNQAF-----VQVIREHLALLECEPNGTICYASDAFAHLCRVSAEAMVGADFAN 112
+D+T QV Q + I + +A++E +GT+ A+ F + + + G
Sbjct: 128 TDITAQVRQTADFEGRIDAIDKVMAVIEFSLDGTVLDANANFLEVMGYRLDEIRGQHHRL 187
Query: 113 LWRTHQQPSVQRLLQDAKKGH---PVSAELQLSRSQEAIWIKADLYPIKAINGQLQNVVV 169
Q+ S + + K G ++ R +WI+A P+ G+ V+
Sbjct: 188 FVEPAQRQSAEYRVFWEKLGRGEFDAGRYKRVGRDGREVWIQASYNPVLDERGRPYKVIK 247
Query: 170 LLQDITAAKLEKIDRSGQMNAVNLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHH 229
DIT +E D G++ A+ VIEF LDG +L+AN NFL +GY+ DE G+HH
Sbjct: 248 YATDITRQVVESADADGRIQAIAKVMGVIEFDLDGRVLSANDNFLAILGYRADEAIGKHH 307
Query: 230 SMFVDEQYKQSQEYQHFWQRLRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKV 289
S+FVD Y S++Y+ FW L G+F Y+R K G WIQASYNPI+D G+PYKV
Sbjct: 308 SVFVDAAYSASEDYRQFWATLARGQFDAGRYRRLRKDGSTAWIQASYNPILDVSGRPYKV 367
Query: 290 VKYATNVTQRKMVVNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIIT 349
VKYAT+VT + V +R +R ++
Sbjct: 368 VKYATDVTDQ---VRSAER-----------------------------------MRDLVR 389
Query: 350 DINSVAATIKLAATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANI 409
+A ++ A IS N +L SR Q+ ++QT++S+E+L TVR NS+NA A
Sbjct: 390 QTMGIAQNVQREAHHISASNQELVSRAASQSDAVQQTSTSIEQLAETVRANSENAGAAQH 449
Query: 410 LAGKATEIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAAR 469
+A ++ +A G +I +VV T +SI ++ +I II VIDGIAFQTNILALNAAVEAAR
Sbjct: 450 MAEESATVARKGAHVIAEVVQTTSSIRKATDRIGQIIEVIDGIAFQTNILALNAAVEAAR 509
Query: 470 AGEQGRGFSVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVS 529
AGEQGRGF+VVA+EVRSLAQR + +A++I++LI D+ +++ +G+ L +++G M+D+V S
Sbjct: 510 AGEQGRGFAVVATEVRSLAQRCSVSAREIRSLIEDATNQVGDGSRLAEQAGKVMQDMVTS 569
Query: 530 IKRVHDLMADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQL 589
+ +V + IA+AS QA I+ NQA+ + + A +V++ A ++ L A A+ L
Sbjct: 570 VLKVTATVEQIAAASQVQAQDISTANQALQSIGVQARDQAQMVDDLARSARVLEADADAL 629
Query: 590 Y 590
+
Sbjct: 630 F 630
Score = 132 bits (333), Expect = 4e-35
Identities = 135/503 (26%), Positives = 219/503 (43%), Gaps = 80/503 (15%)
Query: 190 AVNLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEYQHFWQR 249
A++ AVIEF L+G IL AN NFL +GY+L+++ G+HH MFV ++S Y+ FW
Sbjct: 24 AMDRVMAVIEFDLEGRILDANHNFLALMGYRLEDVVGKHHRMFVHPSERESDGYRQFWDT 83
Query: 250 LRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMVVNEVKRV 309
LR G+F Y R G G +E+WI ASYNP++D GKPY+VVKYAT++T +
Sbjct: 84 LRRGDFHAGRYCRLGNGEREVWINASYNPLLDRSGKPYRVVKYATDITAQ---------- 133
Query: 310 MTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDIN-SVAATIKLAATEISNG 368
+ T FEG + +V++ +L + D N + + EI
Sbjct: 134 ----------VRQTADFEGRIDAIDKVMAVIEFSLDGTVLDANANFLEVMGYRLDEIRGQ 183
Query: 369 NTDLSSRTEQQAS-----------NLEQTASSMEELNSTVRQNSDNAMQANIL--AGKAT 415
+ L Q+ S E A + + R+ A +L G+
Sbjct: 184 HHRLFVEPAQRQSAEYRVFWEKLGRGEFDAGRYKRVGRDGREVWIQASYNPVLDERGRPY 243
Query: 416 EIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALN---AAVEAARAGE 472
++ ++ QVV + A + Q IA ++GVI+ +L+ N A+ RA E
Sbjct: 244 KVIKYATDITRQVVES-ADADGRIQAIAKVMGVIE-FDLDGRVLSANDNFLAILGYRADE 301
Query: 473 Q-GRGFSVVASEVRS-----------LAQRSANAAKDIKALISDSVSKI-SNGNELVDRS 519
G+ SV S LA+ +A + + S + I ++ N ++D S
Sbjct: 302 AIGKHHSVFVDAAYSASEDYRQFWATLARGQFDAGRYRRLRKDGSTAWIQASYNPILDVS 361
Query: 520 GSTMK---------DIVVSIKRVHDLMADIASASAEQATGINEVNQAVNQMDEMTQQNAA 570
G K D V S +R+ DL+ Q GI + Q + ++ N
Sbjct: 362 GRPYKVVKYATDVTDQVRSAERMRDLV--------RQTMGIAQNVQ--REAHHISASNQE 411
Query: 571 LVEEAAAASESLLAQAEQLYDHVAMFRLPDQDTSAPSLLKAVNKRPQSAPVTR---HPAS 627
LV AA+ S+++ + + R ++ A A + +SA V R H +
Sbjct: 412 LVSRAASQSDAVQQTSTSIEQLAETVRANSENAGA-----AQHMAEESATVARKGAHVIA 466
Query: 628 HIAKTPAKITAKASSRAQPVMQV 650
+ +T + I KA+ R +++V
Sbjct: 467 EVVQTTSSI-RKATDRIGQIIEV 488