Pairwise Alignments
Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 593 a.a., chemoreceptor methyl-accepting chemotaxis protein from Sinorhizobium meliloti 1021
Score = 402 bits (1034), Expect = e-116
Identities = 218/521 (41%), Positives = 337/521 (64%), Gaps = 16/521 (3%)
Query: 140 QLSRSQEAIWIKADLYPIKAINGQLQNVVVLLQDITAAKLEKIDRSGQMNAVNLTQAVIE 199
+L++ IWI+A P+ NG+ VV DITAAK++ + +G+++A++ +QA+IE
Sbjct: 88 RLAKGGREIWIQASYNPVFR-NGKPCKVVKFATDITAAKMKATEDAGKLDAISRSQAMIE 146
Query: 200 FTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEYQHFWQRLRSGEFFVDE 259
F+ G ++TAN+NF T+GYQL EIQGRHHSMF + Y + EY FW+RL GEF +E
Sbjct: 147 FSPAGEVMTANENFCNTLGYQLSEIQGRHHSMFCEPGYTGTAEYADFWRRLAQGEFIANE 206
Query: 260 YKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMVVNEVKRVMTALSSGDLS 319
+ R+GKGGKE+WIQA+YNPI D G+ YKVVK+AT+VT+R +N + + AL+ GDL+
Sbjct: 207 FVRYGKGGKEVWIQAAYNPIRDPNGRVYKVVKFATDVTERMAAINSLGAGLRALAEGDLA 266
Query: 320 AQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEISNGNTDLSSRTEQQ 379
+ PF + + ++ +V L + + + A+ I A EI + LS RTEQQ
Sbjct: 267 QSIDTPFVPSMEMVRKDFNEALVRLCRAMQTVGENASAIAGGAREIRSAADALSKRTEQQ 326
Query: 380 ASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELIEQVVVTMASINESA 439
A+++E+TA++++E+ +TV +S A +A L K + A G +++ + M I +S+
Sbjct: 327 AASVEETAAALDEITTTVADSSRRAEEAGNLVAKTKDGAERSGLVVKSAIGAMGQIEQSS 386
Query: 440 QKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLAQRSANAAKDIK 499
++I++IIGVID IAFQTN+LALNA VEAARAGE G+GF+VVA EVR LAQRSA+AAKDIK
Sbjct: 387 REISNIIGVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSASAAKDIK 446
Query: 500 ALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASAEQATGINEVNQAVN 559
LI+ S + NG LV ++G+ ++ I+ ++ ++ ++ I A+ EQ+TG+ E+NQAVN
Sbjct: 447 TLITASGEHVRNGVSLVGQTGTALETILAQVQEINHNVSAIVEAAREQSTGLKEINQAVN 506
Query: 560 QMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRL-PDQDTSAPSLLKAVNKRPQS 618
MD+ TQQNAA+VEE+ AAS + +A+ L+ + FR+ D ++ + ++A +
Sbjct: 507 AMDQTTQQNAAMVEESTAASHRMSQEADALHALLRQFRIGRDASPASDNRMEAPH----- 561
Query: 619 APVTRHPASHIAKTPAKITAKASSRAQPVMQVAHDEEWESF 659
+P H + T ++ +R+ + A D +WE+F
Sbjct: 562 SPTRLHATAK--------TLRSGTRSNLALAPAAD-DWENF 593
Score = 132 bits (332), Expect = 4e-35
Identities = 109/396 (27%), Positives = 175/396 (44%), Gaps = 70/396 (17%)
Query: 188 MNAVNLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEYQHFW 247
++A++ +QA+I+F L G +L AN+NF + +GY L EI G+HH +F ++ ++EY+ FW
Sbjct: 14 IDALSKSQAIIQFDLAGNVLDANENFCKALGYSLQEIVGQHHRIFCAPEFVATEEYREFW 73
Query: 248 QRLRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMVVNEVK 307
RL GE + Y+R KGG+EIWIQASYNP+ GKP KVVK+AT++T KM E
Sbjct: 74 ARLGRGELDSNSYRRLAKGGREIWIQASYNPVF-RNGKPCKVVKFATDITAAKMKATEDA 132
Query: 308 RVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEISN 367
+ A+S EF+ GEV +T + T+ +EI
Sbjct: 133 GKLDAISRSQAMI--------EFSPAGEV-----------MTANENFCNTLGYQLSEIQG 173
Query: 368 GNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGEL-IE 426
+ S E + + A L Q +A + G E+ I+
Sbjct: 174 RHH--SMFCEPGYTGTAEYADFWRRL-----------AQGEFIANEFVRYGKGGKEVWIQ 220
Query: 427 QVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRS 486
+ N K+ + F T++ AA+ + AG +R+
Sbjct: 221 AAYNPIRDPNGRVYKV---------VKFATDVTERMAAINSLGAG------------LRA 259
Query: 487 LAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASAE 546
LA+ + A+ I S+ + KD ++ R+ M + ++
Sbjct: 260 LAE--GDLAQSIDTPFVPSMEMV-------------RKDFNEALVRLCRAMQTVGENASA 304
Query: 547 QATGINEVNQAVNQMDEMTQQNAALVEEAAAASESL 582
A G E+ A + + + T+Q AA VEE AAA + +
Sbjct: 305 IAGGAREIRSAADALSKRTEQQAASVEETAAALDEI 340
Score = 32.0 bits (71), Expect = 8e-05
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 27/122 (22%)
Query: 69 VQVIREHLALLECEPNGTICYASDAFAHLCRVSAEAMVG--------------ADFANLW 114
+ I A++E P G + A++ F + + G A++A+ W
Sbjct: 135 LDAISRSQAMIEFSPAGEVMTANENFCNTLGYQLSEIQGRHHSMFCEPGYTGTAEYADFW 194
Query: 115 RTHQQPSVQRLLQDAKKGHPVSAE-LQLSRSQEAIWIKADLYPIKAINGQLQNVVVLLQD 173
R RL Q G ++ E ++ + + +WI+A PI+ NG++ VV D
Sbjct: 195 R--------RLAQ----GEFIANEFVRYGKGGKEVWIQAAYNPIRDPNGRVYKVVKFATD 242
Query: 174 IT 175
+T
Sbjct: 243 VT 244