Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 860 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  302 bits (773), Expect = 5e-86
 Identities = 160/317 (50%), Positives = 236/317 (74%), Gaps = 2/317 (0%)

Query: 302 VVNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLA 361
           V+++V  +   L+ GDL+ ++   +EG+F +L    +  +  L +++  I+  A T+   
Sbjct: 531 VISDVVDMFDGLAKGDLTRKINGEYEGQFGKLKADANATVSRLTEVLGGISESANTVTSG 590

Query: 362 ATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASG 421
           A EI+ GN DLS RTE+QA++LE+TASSME++ +TV+Q+++NA  AN LA +A+  A  G
Sbjct: 591 AEEIAQGNADLSQRTEEQAASLEETASSMEQMTATVKQSAENATLANTLAKEASTKADHG 650

Query: 422 GELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVA 481
           G++++Q V  M +INES+++IADIIGVID IAFQTN+LALNAAVEAARAGEQGRGF+VVA
Sbjct: 651 GKVVKQAVTAMEAINESSKRIADIIGVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVA 710

Query: 482 SEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIA 541
            EVR+LAQRSA AAK+IK LI DSV+K+++G  LV++SG+T+++IV ++ +V +++ +I+
Sbjct: 711 GEVRNLAQRSAGAAKEIKELIRDSVNKVNDGTSLVNQSGNTLQEIVHAVSKVAEMINEIS 770

Query: 542 SASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQ 601
            A+ +QA+GI EVN+AV+QMDEMTQQNAALVEE +AA +++  QA  +   +  FR   Q
Sbjct: 771 VAAEQQASGIQEVNKAVSQMDEMTQQNAALVEEVSAAGDAMAEQARNMRRQLGFFRTDVQ 830

Query: 602 DTSAP--SLLKAVNKRP 616
            +SA   +L+    KRP
Sbjct: 831 ASSAAPLALVAGGEKRP 847