Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., methyl-accepting chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  309 bits (791), Expect = 3e-88
 Identities = 169/323 (52%), Positives = 233/323 (72%), Gaps = 4/323 (1%)

Query: 309 VMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEISNG 368
           +  A++ GDLS Q+    + E  +L + +      L QI+  +     TI +A+ EI++G
Sbjct: 228 IAQAVAGGDLSRQIEVRSQDETGQLMQALKDMTQRLYQIVAVVRQGTETITMASKEITSG 287

Query: 369 NTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELIEQV 428
           N DLS+RTEQQA +LE+TAS+M +L STV+QN+DNA QAN LA  A+E+A  GGE++ QV
Sbjct: 288 NLDLSARTEQQAGSLEETASAMAQLTSTVKQNADNASQANQLAASASEVAVRGGEVVRQV 347

Query: 429 VVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLA 488
           V TM SIN+S+ +I DII VIDGIAFQTNILALNAAVEAARAGEQGRGF+VVASEVRSLA
Sbjct: 348 VDTMTSINQSSTRIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA 407

Query: 489 QRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASAEQA 548
           QR+A+AA++IK LI DSV K+  G+ LVD++G TM+++V ++++V D++ +I+SAS EQ+
Sbjct: 408 QRAASAAREIKDLIDDSVEKVGKGSALVDQAGKTMEEVVTAVRKVTDMVGEISSASQEQS 467

Query: 549 TGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQDTS---- 604
            GI E+++A+  MD  TQQNAALVE+AAAA+++L  QAE+L   ++ FRL    ++    
Sbjct: 468 QGIQEIDRAIVLMDSSTQQNAALVEQAAAAAQALEDQAEKLSLAMSAFRLGGAHSAERLG 527

Query: 605 APSLLKAVNKRPQSAPVTRHPAS 627
           AP +    +    S    R PAS
Sbjct: 528 APPVAAQSSSGKSSEAAERVPAS 550