Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  339 bits (869), Expect = 2e-97
 Identities = 188/358 (52%), Positives = 252/358 (70%), Gaps = 1/358 (0%)

Query: 303 VNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAA 362
           +NE  +V TA+++GDL+ Q+    + E   L   +      L +I+ ++ +   TI  A+
Sbjct: 218 LNEAVQVATAVAAGDLTVQIEATSKDETGALLGALKSMNDNLHRIVAEVRAGTDTINTAS 277

Query: 363 TEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGG 422
            EI+ GN DLSSRTEQQA  LE+TAS+MEEL STVRQN+DNA QAN LA  A+++A  GG
Sbjct: 278 REIATGNLDLSSRTEQQAGALEETASAMEELTSTVRQNADNARQANTLAETASQVAIQGG 337

Query: 423 ELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAS 482
            ++ +VV TM  IN++++KI DII VIDGIAFQTNILALNAAVEAARAGEQGRGF+VVAS
Sbjct: 338 SVVGEVVQTMGQINDASRKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 397

Query: 483 EVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIAS 542
           EVR+LAQRSA AAK+IK+LI  SV ++ +G+ LV ++G+TM+++V S+KRV D++A+I +
Sbjct: 398 EVRTLAQRSAAAAKEIKSLIDASVERVESGSRLVGQAGATMEEVVASVKRVTDVVAEITA 457

Query: 543 ASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQD 602
           AS EQ+ GI ++NQA+ QMDE+TQQNAALVE+AAAA++SL  Q+ +L D V +FRL +  
Sbjct: 458 ASGEQSDGIEQINQAIVQMDEVTQQNAALVEQAAAAAQSLQEQSGRLSDTVGIFRLGNDH 517

Query: 603 TSAPSLLKAVNKRPQSAPVTRHPASHIAKTPAKITAKASSRAQPVMQVA-HDEEWESF 659
              PS L A  +R       R   +    T     AK+   AQPV Q A  D +WE F
Sbjct: 518 AHQPSPLSAPVQRSVQVAPARPVLARKPVTRTSAPAKSIPAAQPVAQAALADGQWEQF 575