Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., methyl-accepting chemotaxis protein from Caulobacter crescentus NA1000

 Score =  432 bits (1112), Expect = e-125
 Identities = 232/544 (42%), Positives = 346/544 (63%), Gaps = 3/544 (0%)

Query: 69  VQVIREHLALLECEPNGTICYASDAFAHLCRVSAEAMVGAD---FANLWRTHQQPSVQRL 125
           +  + + LA++E +  GTI  A+  F       A  ++G     F +      Q      
Sbjct: 45  IDALDKSLAMIEFDVKGTILAANANFCKAMGYEAREIIGKHHSLFVDPEYAASQAYRDFW 104

Query: 126 LQDAKKGHPVSAELQLSRSQEAIWIKADLYPIKAINGQLQNVVVLLQDITAAKLEKIDRS 185
           +Q  +        L+L +    +WI+A   P+K   G++  ++ +  DITA K  + +R+
Sbjct: 105 MQLGQGQFDAREYLRLGKGGREVWIQASYNPVKNSAGKVTRILKVATDITAQKEVEAERT 164

Query: 186 GQMNAVNLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEYQH 245
            +++AV   QA IEFT+DG IL AN+NFL TVGY L EIQG+HHSMFVD    +S+ Y  
Sbjct: 165 AKLDAVERVQATIEFTVDGVILNANENFLATVGYALSEIQGKHHSMFVDPAEARSEAYAA 224

Query: 246 FWQRLRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMVVNE 305
           FW+RL +GEF   E++R GKGGKE+WIQASYNP+ D++G+  KVVK+AT+VT R   VN+
Sbjct: 225 FWRRLNTGEFVAAEFRRIGKGGKEVWIQASYNPVFDAKGRVVKVVKFATDVTGRVDAVNQ 284

Query: 306 VKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEI 365
           + + +  L++ DLS ++    + +FA + +  +  +  L + I  + S    +   A EI
Sbjct: 285 IAQALARLAANDLSYRMAAQIDAQFASVRDDFNDAVAALDETIGAVASATRNVATGANEI 344

Query: 366 SNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELI 425
           S  + +LS RTEQQA++LE+TA++++E+ +TV +++D A +A++ A  A   AA  GE++
Sbjct: 345 STASDNLSRRTEQQAASLEETAAALDEITATVSRSADGAKRASVAASDARVDAAKSGEIV 404

Query: 426 EQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVR 485
            + V  M  I  S+ +I  II VID IAFQTN+LALNA VEAARAGE GRGF+VVA EVR
Sbjct: 405 GEAVSAMDGIESSSNQINQIISVIDEIAFQTNLLALNAGVEAARAGEAGRGFAVVAQEVR 464

Query: 486 SLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASA 545
           +LAQRSA AAK+IK LI++S +++  G +LV  +G  ++ IV  +  +  L+++IA +S 
Sbjct: 465 ALAQRSAEAAKEIKVLIANSSTQVERGVKLVGETGRALQSIVSKVSEIDTLISEIAQSSR 524

Query: 546 EQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQDTSA 605
           EQATG+ EVN AVNQMD++TQQNAA+VEEA AA+ SL  +A++L   +A F +  +    
Sbjct: 525 EQATGLGEVNVAVNQMDQVTQQNAAMVEEATAAAASLRHEADELDKLIARFHVTARAARR 584

Query: 606 PSLL 609
           P L+
Sbjct: 585 PRLV 588