Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  394 bits (1011), Expect = e-114
 Identities = 217/357 (60%), Positives = 271/357 (75%), Gaps = 10/357 (2%)

Query: 303 VNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAA 362
           + +V RV+ AL+ GDL+ ++ + +EG F +L    +Q    L  +I DI   A TI  A+
Sbjct: 311 LQDVARVLMALAEGDLTTRIYNDYEGTFNDLKNYSNQTAEKLSYMIRDIQKAADTINTAS 370

Query: 363 TEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGG 422
           +EI+ GN DLSSRTE+QAS+LEQT++SMEEL  TV+ N+DNA QAN LA KA ++A  GG
Sbjct: 371 SEIAQGNADLSSRTEEQASSLEQTSASMEELTGTVKLNADNASQANALASKAADVAVDGG 430

Query: 423 ELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAS 482
           ELI+QVV TMASINESA+KIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF+VVAS
Sbjct: 431 ELIQQVVQTMASINESARKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 490

Query: 483 EVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIAS 542
           EVRSLAQRSANAAKDIKALISDSV+KI +GN LV +SG TMK+IV++IKRV+D+MA+IAS
Sbjct: 491 EVRSLAQRSANAAKDIKALISDSVTKIESGNSLVGKSGDTMKEIVIAIKRVNDIMAEIAS 550

Query: 543 ASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQD 602
           AS EQA GI+E+++AV QMDEMTQQNAALVEEAAAA+ES+ +QA+QL D VA F + +  
Sbjct: 551 ASNEQAIGIDEISKAVVQMDEMTQQNAALVEEAAAAAESMQSQAQQLADSVANFTVDEDT 610

Query: 603 TSAPSLLKAVNKRPQSAPVTRHPASHIAKTPAKITAKASSRAQPVMQVAHDEEWESF 659
           ++AP  + +  K        + P S + + P K  A A     P +  A  +EWE F
Sbjct: 611 SAAPKSVASTKKL-----AVKQPPSTVTRMPVKPKAMA-----PKVNKADQDEWEDF 657