Pairwise Alignments

Query, 284 a.a., 4-hydroxybenzoate octaprenyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., protoheme IX farnesyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 9/262 (3%)

Query: 2   TAVKARAYWQLMRMDRPIGSLLLLWPTLWALLLAAQGLPDLRVLVVFVLGVFLMRSAGCV 61
           T +  RAY   + M +P    L+L   L  + LA  G   ++ L+  ++G+ +M  A   
Sbjct: 13  TPLPWRAY---LEMTKPRVVALMLLTVLVGMCLAVPGAVPVQPLIAGLVGIGMMAGAAAA 69

Query: 62  INDYADRHVDGHVKRTSQRPLPAGLVSAKEALLLFVLLAVSSF-LLVLTMNTLTIQLSFI 120
            N   DR +DG + RT  RPLP G +S  +AL     +A+  F LL   +N LT  L+F 
Sbjct: 70  YNHLIDRRIDGLMARTYNRPLPKGRISITKALTFATAMAILGFALLYWAVNPLTAWLTFA 129

Query: 121 GIL-LAFVY-PFMKRFTHLPQLVLGLAFSWSIPMAWAAQANTLTPQVWVLFLINALWTIA 178
            ++  A +Y  ++KR T    +V GLA +    + W A          +L +I   WT  
Sbjct: 130 SLIGYAVIYTAYLKRATPQNIVVGGLAGAMPPLLGWTAITGEFHGHALLLVIIIFAWTPP 189

Query: 179 YDTQYAMVDRDDDVKIGIKSTAILFG-RWDKRIIGLLQ-LATLSLLVALGQGLALGTSYY 236
           +    A+  R +  K+ +    +  G  + K  I L   L  L+ L  +  G+  G  Y 
Sbjct: 190 HFWALAIHRRAEYAKVDVPMLPVTHGVEFTKTCIMLYTVLLALACLYPVLVGMC-GPLYL 248

Query: 237 WGLLIAAGLFAYQQHLIRYRER 258
            G  + +  F Y+   ++YR++
Sbjct: 249 VGSTLLSCGFIYKAWQLKYRDK 270