Pairwise Alignments

Query, 284 a.a., 4-hydroxybenzoate octaprenyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., protoheme IX farnesyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 11/255 (4%)

Query: 8   AYWQLMRMDRPIGSLLLLWPTLWALLLAAQGLPDLRVLVVFVLGVFLMRSAGCVINDYAD 67
           A+     M +P    L+L   L  + LA   +  ++ L+  +LG+ +M  +   +N   D
Sbjct: 16  AWRDYFEMTKPKVVALMLLTVLVGMCLAMPTILPVQPLIAGLLGIAMMAGSAAALNHLID 75

Query: 68  RHVDGHVKRTSQRPLPAGLVSAKEALLLFVLLAVSSF-LLVLTMNTLTIQLSFIGIL-LA 125
           R +DG + RT  RPLP G +SA  AL+    L    F +L +  N LT  L+F  ++  A
Sbjct: 76  RRIDGLMARTYNRPLPKGRISATRALIFAAALGSLGFVILYVFTNPLTAWLTFASLIGYA 135

Query: 126 FVY-PFMKRFTHLPQLVLGLAFSWSIPMAWAAQANTLTPQVWVLFLINALWTIAYDTQYA 184
            +Y  ++KR T    ++ GLA +    + W A  N       +L +I  LWT  +    A
Sbjct: 136 LIYTAYLKRATPQNIVIGGLAGAMPPLLGWTAVTNQFHGHALLLVIIIFLWTPPHFWALA 195

Query: 185 MVDRDDDVKIGIKSTAILFGRWDKRIIGLLQLATLSLLVALGQGLALGTSYYW------- 237
           +  R +  K+ I    +  G    +   LL    L++   L   + +    Y+       
Sbjct: 196 IHRRAEYAKVDIPMLPVTHGVEFTKTCILLYTILLAIACLLPVLVGMSGPLYFVCSSALS 255

Query: 238 -GLLIAAGLFAYQQH 251
            G +  A    YQ H
Sbjct: 256 CGFIYKAWQLKYQDH 270