Pairwise Alignments

Query, 209 a.a., repressor LexA from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., putative prophage repressor (RefSeq) from Shewanella sp. ANA-3

 Score = 45.4 bits (106), Expect = 9e-10
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 115 QADFLLRVHGESMKNIGILDGDLLAVHKTQDVRNGQVVVARVEDDVTVKRLERKGSKVFL 174
           ++ F+ R  GESM  +GI  GD+L V +     +G V++A   ++   K L+   S+  L
Sbjct: 149 ESTFVGRARGESMTGVGIHSGDILIVSRQLTPSSGDVIIAMYNEEFVCKVLDLSNSR--L 206

Query: 175 HAENEEFAPIEVDLAAQSLTIEGIAVGVIR 204
            + N++F P+ + L       EG+    IR
Sbjct: 207 LSANDDFEPVSIRL-DDRFWCEGVVPASIR 235



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 114 PQADFLLRVHGESMKNIGILDGDLLAVHKTQDVRNGQVVVARVEDDVTVKRLERKGSKVF 173
           P A     V  ++M  +G+  GDLL V K+     G VV+A V  +   ++L+       
Sbjct: 41  PSATVFAEVTDDAMTGLGLFTGDLLVVDKSLTATRGDVVLALVHGETVCRQLDDDHDHHQ 100

Query: 174 LHAE-NEEFAPIEVDLAAQSLTIEGIAVGVIR 204
           LHA  N  ++ I V      + I+G+A+  +R
Sbjct: 101 LHANTNAHYSEISV---TDGIEIQGVAICAVR 129