Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., DNA-damage-inducible protein F from Pseudomonas fluorescens FW300-N2E2

 Score =  376 bits (965), Expect = e-109
 Identities = 200/420 (47%), Positives = 280/420 (66%), Gaps = 1/420 (0%)

Query: 17  HRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRM 76
           HR+V A+A PM+LSNI+VPL+ LVD+ VIGHL HA  LG VA+G+++ +V  W +GFLRM
Sbjct: 14  HRRVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGASLYTVLAWAMGFLRM 73

Query: 77  STTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKTY 136
            TTG  AQA G  +   L +VLLQG ++A+GLA L      P++++  HF   S+E+   
Sbjct: 74  GTTGFAAQAAGRGDGAALRQVLLQGLLLAMGLAVLLGAVGVPLSDVALHFMQPSAELNQL 133

Query: 137 AEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKV 196
              +F+ R +  PAAL ++ L+GW LG QNARAP+ ++++TNL NI L+L  V+GL   V
Sbjct: 134 TRDFFHTRLFGLPAALASYALVGWFLGAQNARAPLAILLVTNLVNIALNLWFVIGLDWGV 193

Query: 197 EGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALNRDIFLRSL 256
            G+A ASVIA++ G L GL       R       ++ +  L +    L+A+NRDIF+RSL
Sbjct: 194 TGSARASVIAEWTGALVGLALARHTLRAWPGQIAWAAL-GLWQSWRPLLAVNRDIFIRSL 252

Query: 257 CLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKDDRQ 316
            LQAVF  +T QGA LGD  VAANA+L++ L++ ++ +DG A+A+EA+ G AIGA+D   
Sbjct: 253 VLQAVFFLITVQGARLGDATVAANALLLNGLLLTAHALDGLAHAVEALCGHAIGARDRLA 312

Query: 317 LRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAMPLIAVW 376
           LR +++ +  W+ +  L  +L+FL  G   I M T+IP V+ATA HYLP+L A+PLIAVW
Sbjct: 313 LRRSLVVACGWSLIASLGFALLFLLAGHLFIDMQTDIPDVRATAYHYLPYLAALPLIAVW 372

Query: 377 CFLLDGVFIGATKGKEMRNSMAVSAVAFFAIYGFMTHYGNHALWLAMLSFMALRGFTLGA 436
            +LLDG+FIGAT+ +EMRN M ++ +    I   +   GNH LW+  L FMALR  TLGA
Sbjct: 373 SYLLDGLFIGATRAREMRNGMLLTLLLVLPIAWALQGLGNHGLWITFLLFMALRSLTLGA 432