Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., putative efflux protein, MATE family from Pseudomonas stutzeri RCH2

 Score =  360 bits (923), Expect = e-104
 Identities = 200/446 (44%), Positives = 281/446 (63%), Gaps = 5/446 (1%)

Query: 4   VSLILQTLKQPNVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTM 63
           +S +L   +    H +V A+A PM+LSN++VPL+ LVD++VIGHL HA  LG VA+G ++
Sbjct: 1   MSSMLAAWRDAPTHSKVWALAAPMILSNLSVPLVALVDSSVIGHLPHAHQLGAVAVGGSL 60

Query: 64  ISVTFWLLGFLRMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELI 123
            ++  W++GFLRM TTG  AQA G  +   L ++LLQG ++ALG A L      P+    
Sbjct: 61  YTLLVWVMGFLRMGTTGFAAQAAGRNDGGALRQILLQGLLLALGFALLLGAIGVPLKGAA 120

Query: 124 FHFSDASSEVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIV 183
                 S+E+      YF+ R +  PAAL ++ L+GW LGTQNARAP+ +++ TNL N+V
Sbjct: 121 LQLMQPSAELDELTRDYFHTRLFGLPAALASYALIGWFLGTQNARAPLAILLTTNLINVV 180

Query: 184 LDLLLVLGLGLKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELS- 242
           LDL  VLGL   V GAA ASVIA+++G L GL    +   ++  P       +L + LS 
Sbjct: 181 LDLWFVLGLDWGVAGAARASVIAEWSGALLGLALTRKALARY--PGRLD-TRALRRWLSW 237

Query: 243 -RLVALNRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAM 301
             L+A+NRDIFLRSL LQ VF  +T QG  LGD  VAANA+L++ L++ ++ +DG A+A+
Sbjct: 238 RPLMAVNRDIFLRSLALQLVFLLVTVQGTRLGDATVAANALLLNGLLLTAHALDGLAHAV 297

Query: 302 EAMVGKAIGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAE 361
           EA+ G AIGA++   L+  M+ +  W+ +  +   L FL  G   IQ+ T+IP V+ TA 
Sbjct: 298 EALAGHAIGARNRDALQRVMVVAGGWSLLASVAFGLFFLLGGQLFIQLQTDIPEVRQTAL 357

Query: 362 HYLPWLVAMPLIAVWCFLLDGVFIGATKGKEMRNSMAVSAVAFFAIYGFMTHYGNHALWL 421
            YLP+L A+PLIAVW +LLDG+FIGAT+ +EMRNSM ++      +   +   GNH LWL
Sbjct: 358 TYLPYLAALPLIAVWSYLLDGLFIGATRAREMRNSMLLAVGLTLPLGWLLQGLGNHGLWL 417

Query: 422 AMLSFMALRGFTLGATFYTQWRAGTF 447
           A LSFM +RG  LG       R G +
Sbjct: 418 AFLSFMLMRGVCLGVLAQRLQRRGAW 443