Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., putative efflux protein, MATE family from Pseudomonas stutzeri RCH2

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 83/354 (23%), Positives = 155/354 (43%), Gaps = 20/354 (5%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           R + A+ALPM+++ +    +G VD  + G +     L  VALG+++    + LL  + ++
Sbjct: 15  RTLFALALPMMIAQLASTAMGFVDTVMAGRVS-PHDLAAVALGNSIWVPVYLLLSGITLA 73

Query: 78  TTGLTAQAHGAQNSQQLARVLLQGSVIA--LGLAALFLLFHRPVAELIFHFSDASSEVKT 135
           TT   AQ +GA    ++  ++ Q   +   +GL +  L+++   AE + H       +  
Sbjct: 74  TTPNVAQRYGAGAHGEIGPLVRQALWMGAGIGLTSALLMWN---AEPVLHLMRVEPALIE 130

Query: 136 YAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLG-LGL 194
              AY    A   PA  L  VL  +  G  + R  M + I+  L NI L+ + + G  G+
Sbjct: 131 PTMAYLRAVACGFPAVALYQVLRCFSDGLGHPRPSMVIGILGLLLNIPLNYVFIYGKFGI 190

Query: 195 KVEGAAIASVIADYAGLLFGLLCVGRY------WRQHQLPAPFSFI--PSLTKELSRLVA 246
              G  +   ++    +LF L+ +  +      +++ QL + F +   P L   LS  V 
Sbjct: 191 PAMGG-VGCGVSTALVMLFMLIAMSVWVKRAPAYQRSQLFSHFEWPRWPMLRHLLSVGVP 249

Query: 247 LNRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVG 306
           +   +F  +    ++FS +     ALG  +VA + + ++F  +I         A+   +G
Sbjct: 250 IGIAVFAEA----SIFSVIALLIGALGATVVAGHQIALNFTSLIFMIPLSLGMAVTVRIG 305

Query: 307 KAIGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATA 360
           + +G    R  R         A +     + + L F   + ++ T  P+V A A
Sbjct: 306 QELGRSAPRDARFVAGVGIAAALVYACFSASVMLLFSEQIARIYTPDPAVIAVA 359