Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a

 Score =  369 bits (946), Expect = e-106
 Identities = 195/432 (45%), Positives = 285/432 (65%), Gaps = 1/432 (0%)

Query: 4   VSLILQTLKQPNVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTM 63
           +S +L   +  + HR+V A+A PM+LSNI+VPL+ LVD+AVIGHL HA  LG VA+G+T+
Sbjct: 1   MSTLLTDWRHRSTHRRVWALATPMILSNISVPLVALVDSAVIGHLPHAHQLGAVAVGATL 60

Query: 64  ISVTFWLLGFLRMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELI 123
            +   W++GFLRM TTG  AQA G  +S  L R+LLQG ++A+GLA L  +   P + L 
Sbjct: 61  YTFLAWVMGFLRMGTTGFAAQAAGRSDSAALRRILLQGLLLAVGLALLLGVIALPFSHLA 120

Query: 124 FHFSDASSEVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIV 183
                 S++++     +F+ R +  PAAL ++ L+GW LG QNARAP+ ++++TN  NIV
Sbjct: 121 LTMMQPSADLQQMTLDFFHTRLFGLPAALASYALVGWFLGAQNARAPLAILLVTNAVNIV 180

Query: 184 LDLLLVLGLGLKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSR 243
           L+L  V+GL   V G+A ASV+A++ G++ GLL      R       +S +  L      
Sbjct: 181 LNLWFVMGLDWGVVGSARASVLAEWTGVVLGLLLARNTLRAWPGRIVWSAL-RLWSNWRP 239

Query: 244 LVALNRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEA 303
           L+A+NRDIFLR+L LQ+V   +T QGA LGD  VAANA+L++ L++ ++ +DG A+A+EA
Sbjct: 240 LLAVNRDIFLRTLALQSVMFLITVQGARLGDATVAANALLLNGLLLTAHALDGLAHAVEA 299

Query: 304 MVGKAIGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHY 363
           + G AIGA+D   LR +++ +  W+ +  ++ +L FL  G   + + T+IP V+ATA  Y
Sbjct: 300 LCGHAIGARDRDTLRRSLVVAGGWSLISSVVFALFFLVAGQGFVSLQTDIPEVRATAMMY 359

Query: 364 LPWLVAMPLIAVWCFLLDGVFIGATKGKEMRNSMAVSAVAFFAIYGFMTHYGNHALWLAM 423
           LP+L  MPL+AVW +LLDG+FIGAT+ +EMRN+M  SA     +    + +GNHALWL  
Sbjct: 360 LPYLALMPLLAVWSYLLDGLFIGATRAREMRNAMLFSAAGIAPLAYLASSHGNHALWLTF 419

Query: 424 LSFMALRGFTLG 435
           L+F  LRG +LG
Sbjct: 420 LAFTLLRGLSLG 431