Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., MATE family efflux transporter from Synechocystis sp000284455 PCC 6803

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 105/425 (24%), Positives = 193/425 (45%), Gaps = 31/425 (7%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHL-EHAWYLGGVALGSTMISVTFWLLGF-LR 75
           R+ L +A+P+  + +     G VD  ++G L +     GG+A   TMI + F + G  L 
Sbjct: 15  REFLKLAVPLAGAQMAQAATGFVDTVMMGWLGQDVLAAGGLA---TMIFMAFMMTGVGLI 71

Query: 76  MSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAEL--IFHFSDASSEV 133
              + L A+A+GA  ++++ ++  QG  I L L+   +LF   +  L  + H+S  +   
Sbjct: 72  SGVSPLVAEAYGAGQTRRIGQLTRQGLWIVLLLSIPGMLF---ITHLNGVMHWSGQADTT 128

Query: 134 KTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGL- 192
              +++Y  + AW    A+    L G ++    AR  M +VI   L NI+ +  L  G  
Sbjct: 129 IILSDSYLNVMAWGLFPAIAFATLRGCIIALSQARPIMLIVIAATLFNILGNYGLGFGKW 188

Query: 193 ---GLKVEGAAIASVIADYAGLLFGLLCVGRYWRQ--HQLPAPFSFIPSLTKELSRLVAL 247
               L + G AIAS+ A +  ++F  L V   W +  HQ     S      + L +L+ +
Sbjct: 189 GFPALGITGLAIASISAHW--IMFLSLLVYMLWHKPLHQYSLFDSLHHLKPRILQQLLWV 246

Query: 248 NRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGK 307
              I + ++    ++   +F   ALG  I+AA+ V+   ++++       +YA    VG+
Sbjct: 247 GGPIGIAAVLEYGLYLTASFFMGALGTPILAAHQVVSQTVLVLFMVPLAMSYAATVRVGQ 306

Query: 308 AIGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWL 367
             G +   Q+R A + S   A +  L   +  L +   +I +  ++ +  A  E  L   
Sbjct: 307 WFGQQHWPQIRQAALVSIGLAVLFMLTAGIALLAYPQQIIGLYLDL-NDPANGE-ALNVG 364

Query: 368 VAMPLIAVWCFLLDGV---FIGATKG-KEMRNSMAVSAVAFFAI-------YGFMTHYGN 416
           +++  IA +  +LDG+     G  +G ++ R  M +  +A++ I        GF T    
Sbjct: 365 ISIMKIAAFGLVLDGLQRTANGVLQGLQDTRIPMVLGTIAYWGIGLTASYLLGFYTPLSG 424

Query: 417 HALWL 421
             +W+
Sbjct: 425 AGVWI 429