Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., MATE efflux family protein from Synechococcus elongatus PCC 7942

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 95/434 (21%), Positives = 188/434 (43%), Gaps = 29/434 (6%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           +Q L +A+P+  + +    +G VD  ++G L       G  L S +          + M+
Sbjct: 9   QQFLQLAIPLAAAQVAQAAVGFVDTVMMGRLGPEPLAAG-GLASALFQFILATASGVVMA 67

Query: 78  TTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKTYA 137
            + L A+A GA    ++A +  QG  +++ L    +L    +A L+     +++ +   A
Sbjct: 68  VSPLVAEAQGAGKDYKIAAIARQGLWLSVLLGLPVMLIISQLARLMPVLGQSATTI-ALA 126

Query: 138 EAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLG-LG--- 193
             Y+    W     L   +L G++   + AR  + +V+   L N + + LL  G LG   
Sbjct: 127 RDYWMAVLWGIIPGLGFAMLRGYVAALEQARIILPLVLFGTLVNGLGNYLLGYGQLGFPR 186

Query: 194 LKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPF-----SFIPSLTKELSRLVALN 248
           L++ G  ++S +  +  +  GLL     W+      PF        PS+ +++   + L 
Sbjct: 187 LELTGLGLSSALGLWV-MFLGLLAYTA-WQPKLRRYPFWQDWRRLQPSICRQI---LQLG 241

Query: 249 RDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKA 308
             I +       +F+ +T    A+G + +AA+  +   +++I     G ++A+   VG  
Sbjct: 242 WAIAVTVAVEFGLFTIITILMGAIGVEALAAHQTVSQTIILIFMVPLGCSFAVTVRVGWW 301

Query: 309 IGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLV 368
           +G +D    R A +       +  LLL++    F   ++ +  ++ +        L   +
Sbjct: 302 LGRQDGLGARRAGLVGVGAIALWMLLLAIPLALFPRAIVGIYVDLNNPVNAG--LLNLAL 359

Query: 369 AMPLIAVWCFLLDGV---FIGATKG-KEMRNSMAVSAVAFF-------AIYGFMTHYGNH 417
            M  +A    +LDGV    +GA  G ++ R  + +S +AF+       A+ GF   +G+ 
Sbjct: 360 PMLRVASLALVLDGVQRVAMGALHGLQDTRIPLLLSLLAFWMVGVGSSAMLGFQLGWGST 419

Query: 418 ALWLAMLSFMALRG 431
            LW+     +A+ G
Sbjct: 420 GLWIGQSLGVAIAG 433