Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., DNA-damage-inducible protein F (RefSeq) from Shewanella amazonensis SB2B

 Score =  409 bits (1052), Expect = e-119
 Identities = 214/425 (50%), Positives = 279/425 (65%), Gaps = 3/425 (0%)

Query: 15  NVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFL 74
           + H+++ A+ALPM+LSNITVPLLGLVD A++GHL  A+YLG VALGST+ ++  WLLGFL
Sbjct: 6   SAHQRLWALALPMMLSNITVPLLGLVDTAIMGHLSEAYYLGAVALGSTVFTLIVWLLGFL 65

Query: 75  RMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVK 134
           RM+TTGLTAQA GA   +   R+L+QG  +ALG   L LL    +   +  +SDAS+EV+
Sbjct: 66  RMATTGLTAQAWGASQGETQKRILMQGLTLALGAGLLVLLVQPVLLNTLLGWSDASAEVR 125

Query: 135 TYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGL 194
            Y   YF IR WS P AL N V+LGWLLG Q  +  MW +I+ NL NI LD+L V G G 
Sbjct: 126 QYCRDYFAIRIWSLPLALANLVMLGWLLGRQQPKVAMWQLILANLVNIALDVLFVFGFGW 185

Query: 195 KVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALNRDIFLR 254
            V GAA+ASVIAD            + WR    P+P   +  +   L +L  LNRDIF+R
Sbjct: 186 GVAGAALASVIADLCAFSIAAFFTAKAWRTLACPSP--VLRDIMANLGQLFRLNRDIFIR 243

Query: 255 SLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKDD 314
           SLCLQA F+FMTF+GA LGD  VAANAVL++FLM+ SY +DG AY  EA  G A+G +D 
Sbjct: 244 SLCLQATFAFMTFKGAGLGDTTVAANAVLLNFLMLTSYALDGIAYYAEAETGAAVGRRDP 303

Query: 315 RQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAMPLIA 374
             L + +  +  W+ +   L S  F  +G  L  ++T+I +VQ  A  +LPWL+AMPL+A
Sbjct: 304 AALDSTVALAFAWSAVFACLFSGGFALWGEWLSTLMTDISAVQQLANEFLPWLIAMPLLA 363

Query: 375 VWCFLLDGVFIGATKGKEMRNSMAVSAV-AFFAIYGFMTHYGNHALWLAMLSFMALRGFT 433
              +L DGV+IGAT+G+ MRNSM +S V  FF ++   + +GNHALWLAM  FM  R  +
Sbjct: 364 FGSYLFDGVYIGATQGRVMRNSMLLSTVGVFFPLWWGFSDWGNHALWLAMGGFMLCRSLS 423

Query: 434 LGATF 438
           LG  F
Sbjct: 424 LGWHF 428