Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 24/322 (7%)

Query: 34  VPLLGLVDAAVIGHLEHA---WYLGGVALGSTMISVTFWLLGFLRMSTTGLTAQAHGAQN 90
           V LL +   +++G  E A    Y G ++  +T I +       L ++     ++A GA+ 
Sbjct: 32  VDLLDIFFLSLLGEAELAAAVGYAGTISFFTTSIGIG------LSIALGAQVSRAIGARE 85

Query: 91  SQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKTYAEAYFYIRAWSAPA 150
                R+L+   ++ L +++L  L        +     A+ +    A  Y YI   S P 
Sbjct: 86  IDNAKRLLMSSLLVTLAVSSLVSLLVSLNIPALLTLVGATGQTAELAADYLYILVPSLPF 145

Query: 151 ALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKVEGAAIASVIADYAG 210
             L   L   L    +A+  M   ++    N+VLD +L+  L + +EGAA+ASV+A    
Sbjct: 146 ICLAMALGAALRAVGDAKLSMVSTLVGGGVNLVLDPILIFVLAMGIEGAAVASVLA---- 201

Query: 211 LLFGLLCVGR-YWRQHQL---PAPFSFIPSLTKELSRLVALNRDIFLRSLCLQAVFSFMT 266
            L  +L  GR  + +H L   P   +F+     +L  + A+     + ++       FMT
Sbjct: 202 RLSVMLVAGRGVFVKHGLGSKPTRDAFV----GDLKPIFAIAGPAMITNVATPIGNGFMT 257

Query: 267 FQGAALGDDIVAANAVLMSFLMMISYGM-DGFAYAMEAMVGKAIGAKDDRQLRTAMISST 325
              A  GD  VA  AVL   L  +++GM    + A+  +VG+  GA+   +LR  +  S 
Sbjct: 258 RAIAEFGDAYVAGWAVL-GRLTPVAFGMIFALSGAIGPIVGQNFGARRYDRLRDCLTQSL 316

Query: 326 FWATMICLLLSLIFLGFGSDLI 347
            + T+  + ++L+ L    DLI
Sbjct: 317 LFCTVYVVGMALV-LFLAQDLI 337