Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 99/436 (22%), Positives = 190/436 (43%), Gaps = 46/436 (10%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           ++++ +ALP++++ +T  ++G +D  + G +  A  +  VA+G ++       +  L ++
Sbjct: 9   KKLVHLALPVLIAQVTQTMMGFIDTVMAGRVS-ALDMAAVAIGGSLWLPALLFVQGLLVA 67

Query: 78  TTGLTAQAHGAQNSQQLARVLLQGSVIALGLAAL---FLLFHRPVAELIFHFSDASSEVK 134
            T + A  HGA N   +  +  Q + IA+  AA+    LLF    A  IF   D S E+ 
Sbjct: 68  FTPVFASHHGADNQNAIRPMAFQAAYIAIIGAAVVISILLF----APQIFKLMDLSPELA 123

Query: 135 TYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLG-LG 193
             + +Y +  AW  PA +L  VL G   G       M +  +    NI  + + + G LG
Sbjct: 124 ELSVSYLHGFAWGVPAFVLYQVLRGCSEGISYTLPTMVIGFVGLAVNIPANYIFIYGHLG 183

Query: 194 LKVEGAA---IASVIADYAGLLFGLLCVGRYWRQHQL---PAPFSFIPSLTKELSRLVAL 247
               G A   IA+ +  +A  +F  + +   W +      P     +P L K + R+   
Sbjct: 184 APALGGAGCGIATALVFWA--MFIAMTIYMQWHKRFAVIKPLGAFHLPDL-KTMKRMTKH 240

Query: 248 NRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGK 307
              I +      ++F+ +    A LG D+VA + + ++F  ++         A+   VG 
Sbjct: 241 GMPIAMALFFEVSLFAIIALLLAPLGADVVAGHQIALNFSSIVFMLPLSIGIAVSIRVGY 300

Query: 308 AIG--AKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLP 365
            +G    D  +L T +  +  ++   C   ++I + F + +  +    P V A A     
Sbjct: 301 YLGQYKADVAKLVTKVGLAIAFSLAAC--TAVITVVFRTQIALLYNQNPEVVALAS---- 354

Query: 366 WLVAMPLIAVWCFLLDGVFI---GATKG-KEMRNSMAVSAVAFFAIYGFMTHY------- 414
              ++  +A    L D V +   GA +G  + R++  ++ V+++AI G +  Y       
Sbjct: 355 ---SLMFLAALYQLSDSVQVVTAGALRGYHDTRSAFYITLVSYWAI-GMVLGYLLAETDI 410

Query: 415 -----GNHALWLAMLS 425
                G H  W+ +++
Sbjct: 411 LVPAMGAHGFWIGLIA 426