Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., Possible DNA-damage-inducible protein F DinF from Mycobacterium tuberculosis H37Rv

 Score =  116 bits (290), Expect = 2e-30
 Identities = 117/438 (26%), Positives = 199/438 (45%), Gaps = 31/438 (7%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           RQ+  +ALP +      PL  L D AV+G L  A  L G+A+GS ++ +      FL   
Sbjct: 11  RQIAQLALPALGVLAAEPLYLLFDIAVVGRLG-AISLAGLAIGSLVLGLVGSQATFLSYG 69

Query: 78  TTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKTYA 137
           TT   A+ +GA N        +Q + +ALGL AL ++     A  +     +   +   A
Sbjct: 70  TTARAARRYGAGNRVAAVTEGVQATWLALGLGALVVVVVEATATPLVSAIASGDGITAAA 129

Query: 138 EAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLG-LGLK- 195
             +  I     PA L++    GWL G Q+   P+  V+    ++ +L  LLV G LGL  
Sbjct: 130 LPWLRIAILGTPAILVSLAGNGWLRGVQDTVRPLRYVVAGFGSSALLCPLLVYGWLGLPR 189

Query: 196 --VEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALNRDIFL 253
             + G+A+A+++  +   L  LL  G    +     P   +      L   + + RD+ +
Sbjct: 190 WGLTGSAVANLVGQW---LAALLFAGALLAERVSLRPDRAV------LGAQLMMARDLIV 240

Query: 254 RSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKD 313
           R+L  Q  +       A  G   +AA+ V++    +++  +D  A A +++VG A+GA D
Sbjct: 241 RTLAFQVCYVSAAAVAARFGAAALAAHQVVLQLWGLLALVLDSLAIAAQSLVGAALGAGD 300

Query: 314 DRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQ-MITNIPSVQATAEHYLPW---LVA 369
               +      T ++ +   +L+   LG GS ++  + T+  SV A     +PW   +V 
Sbjct: 301 AGHAKAVAWRVTAFSLLAAGILAAA-LGLGSSVLPGLFTDDRSVLAAIG--VPWWFMVVQ 357

Query: 370 MPLIAVWCFLLDGVFIGATKGKEMRNSMAVSAVAFFAIYGFMT---HYGNHALWLAMLSF 426
           +P   +  F +DGV +GA     MR +   SA+  F    +++    +G   +W  + +F
Sbjct: 358 LPFAGI-VFAVDGVLLGAGDAAFMRTATVASALVGFLPLVWLSLAYGWGLAGIWSGLGTF 416

Query: 427 MALRGFTLGATFYTQWRA 444
           + LR   +G      WRA
Sbjct: 417 IVLRLIFVG------WRA 428