Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score = 60.8 bits (146), Expect = 8e-14
 Identities = 72/372 (19%), Positives = 156/372 (41%), Gaps = 61/372 (16%)

Query: 15  NVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFL 74
           +V + ++ +++P ++  + + L  +VD   IG         G+AL   +      ++ F 
Sbjct: 12  DVKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIAL---IFPFQMMIMAF- 67

Query: 75  RMSTTGLTAQAHGAQNSQQLARVLLQGS----------------VIALGLAALFLLFHRP 118
                G+T    G   S  L+R L +G+                ++++ +  + ++F  P
Sbjct: 68  -----GVT---FGIGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVP 119

Query: 119 VAELIFHFSDASSEVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQN-------ARAPM 171
           +  L+      S+++  YA+ Y+ I        L   +   +L+   N       A+  M
Sbjct: 120 ILNLL----GTSADIFPYAKDYYEI-------ILYGTIFNSYLVAANNLVRAEGMAKVAM 168

Query: 172 WMVIITNLTNIVLDLLLVLGLGLKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPF 231
           + +++  + NI+LD +L++   + ++GAAIA+V++   G+++ L        +HQ     
Sbjct: 169 FAMVVPAIINIILDPILIIVFNMGIKGAAIATVLSQIIGVIYIL--------KHQFGKNT 220

Query: 232 SFIPSLTKELSRLVALNRDIFL-----RSLCLQAVFSFM--TFQGAALGDDIVAANAVLM 284
           S   ++   L  L  L   +F+       L + ++   +     G   GD  +A   V+M
Sbjct: 221 SIKYAMNDFLINLKILKETVFIGASEFAKLIISSILLILGNNLLGIYGGDIAIAIYGVIM 280

Query: 285 SFLMMISYGMDGFAYAMEAMVGKAIGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGS 344
              M++   + G     + +VG   G     ++  ++  +    + +CLL  ++ + F  
Sbjct: 281 RIAMLLLMPVLGIVQGFQPIVGYNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPE 340

Query: 345 DLIQMITNIPSV 356
             IQ+    P V
Sbjct: 341 KFIQIFITDPEV 352