Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., MATE efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 70.9 bits (172), Expect = 9e-17
 Identities = 104/461 (22%), Positives = 185/461 (40%), Gaps = 34/461 (7%)

Query: 12  KQPNVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLL 71
           ++P  +R+VL I LP+V    +  ++   D   + H         +  G   + +    +
Sbjct: 17  REPGGYREVLHIGLPLVAGMASTTVMQFTDRLFLSHYSVESIAAALPAGLASLLLLLTCM 76

Query: 72  GFLRMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASS 131
           G    ++  + AQ  GA    ++  VL Q  + +L    L L     +AE IF  +  + 
Sbjct: 77  GVTGYASVFI-AQYIGAGQPHRVGGVLWQSLIASLVFGGL-LAMTSLLAEPIFSLAGHAP 134

Query: 132 EVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLG 191
           E++   E YF I    +  +L+   L  +  G    R  M   I   + N+ LD +L+ G
Sbjct: 135 ELQRLEETYFIILQLGSVLSLVGNSLGTFFSGRGRTRPVMLANIAAAVVNVPLDYVLING 194

Query: 192 LG----LKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQ----LPAPFSFIPSLTKELSR 243
           +     + + GAA+A+V+    G+   LL +  + R H+    + + + F   + + L R
Sbjct: 195 VWFFPEMGIAGAAVATVMG--WGVTAVLLAIAVFNRDHETRFGVRSQWRFDAVMMRRLMR 252

Query: 244 LVALNRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEA 303
               +   F   L     F F+      LG+  +AA  +  S   +      G   A+  
Sbjct: 253 YGLPSGVNFFMELFAVTWFVFVV---GTLGEVALAATNIAFSINSVAFLPTVGLNIAVGT 309

Query: 304 MVGKAIGAKDDRQLRTAMISSTFWATMICLLLSLIFL---GFGSDLIQMITNIPSVQATA 360
           MVG+A+G  D      A  S+   A      L+L+F+   G   DL +     P+  A  
Sbjct: 310 MVGQAMGRGDPDGAARATGSTLHVAMAWMTALALVFVLLPGPLVDLFRPDNLTPAAYADI 369

Query: 361 EHYLPWLVAMPLIAVWCFL--LDGVFIGATKGKE----MRNSMAVSAVAFFAIYGF---- 410
                 L+A   +A +C    L  +F GA KG      +  +M V  +    I  +    
Sbjct: 370 RETTARLLA--YVAFYCLFDSLTIIFCGALKGAGDTAFVMWNMTVGCIFVLIIPAYALRA 427

Query: 411 MTHYGNHALWLAMLSFMALRGFTLGATFYTQWRAGTFLPAR 451
           +  +   +LWL    ++++    L    Y ++R G +   R
Sbjct: 428 LGWWSLDSLWLVFSVYVSV----LAVASYVRFRLGRWRKLR 464