Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., putative Na+-driven multidrug efflux pump (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 64.7 bits (156), Expect = 6e-15
 Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 8/202 (3%)

Query: 16  VHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLR 75
           + + ++  A+P +++     L  +VD+  IGH   A  + G+AL   ++++       + 
Sbjct: 15  IGKLLMQYAIPAIIAMTASSLYNMVDSIFIGHGVGAMAISGLALTFPLMNLAAAFGSLVG 74

Query: 76  MSTTGLTAQAHGAQN----SQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASS 131
           +    L +   G ++     + L  VL+   +I L    L L+F  P    I +F   S 
Sbjct: 75  VGAATLVSVKLGQKDYDTAQRVLGNVLVLNIIIGLAFTVLTLIFLDP----ILYFFGGSE 130

Query: 132 EVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLG 191
               YA  Y  +  W      L   L   L    + +  M+  I T + N +LD + + G
Sbjct: 131 ATVGYARDYMVVILWGNVITHLYLGLNAVLRSAGHPQKAMYATIATVVINTILDPIFIYG 190

Query: 192 LGLKVEGAAIASVIADYAGLLF 213
            G  ++GAAIA++ A    LL+
Sbjct: 191 FGWGIQGAAIATITAQVIALLW 212