Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 91/433 (21%), Positives = 188/433 (43%), Gaps = 40/433 (9%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           ++++ +ALP++++ +T  ++G +D  + G +  A  +  VA+G+++       +  L M+
Sbjct: 9   KRLIQLALPVLIAQVTQTMMGFIDTVMAGRVS-AVDMAAVAVGTSLWLPAILFVQGLLMA 67

Query: 78  TTGLTAQAHGAQNSQQLARVLLQGSVIAL--GLAALFLLFHRPVAELIFHFSDASSEVKT 135
            T L A  +GA N + +  +  QG+ +AL  GL  +  L   P+       S  + E + 
Sbjct: 68  FTPLFAHHNGANNQKAIQPLAFQGAYLALIGGLGVMAFLASAPLV-----LSHMNLEPQL 122

Query: 136 YAEAYFYIRA--WSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLG-L 192
           Y     YI    W APA +L  VL G   G       M +  +    NI  + + + G  
Sbjct: 123 YNLTIGYIDGILWGAPAFVLYQVLRGCSEGISYTLPTMIIGFVGLAVNIPANYIFIYGHF 182

Query: 193 GLKVEGAA---IASVIADYAGLLFGLLCVGRYWRQHQLPAPFS-FIPSLTKELSRLVALN 248
           G+   G A   +A+ +  +A +L  +    +  ++    APFS F       + ++  L 
Sbjct: 183 GMPAMGGAGCGVATALVFWA-MLIAMTIYMQLHKKFAALAPFSQFHRPDFATMKKMTKLG 241

Query: 249 RDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKA 308
             I +      ++F+ +    A LG  +VA++ + ++F  ++         A+   +G  
Sbjct: 242 MPIAMALFFEVSLFAIIALLLAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIRIGYY 301

Query: 309 IGAKDDRQLRTAMISSTFW-ATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWL 367
           +G +D   +   +     W A  + L  +++ + F   + ++  + P V   A       
Sbjct: 302 LG-RDRADISAVVAKVGLWLALSLALSTAILTVLFRFQIAELYNSDPEVVVLAG------ 354

Query: 368 VAMPLIAVWCFLLDGVFI---GATKG-KEMRNSMAVSAVAFFAI---YGFMTHY------ 414
            ++ L+A    L D + +   GA +G K+ R++  ++  +++ I    G+   Y      
Sbjct: 355 -SLMLMAALYQLSDSIQVVAAGALRGYKDTRSAFYITLFSYWGIGMTLGYTLAYTDFIVP 413

Query: 415 --GNHALWLAMLS 425
             G H  W  +++
Sbjct: 414 AMGAHGFWTGLIA 426