Pairwise Alignments

Query, 333 a.a., cytochrome C biogenesis protein CcsA from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., cytochrome c551 peroxidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  410 bits (1055), Expect = e-119
 Identities = 200/329 (60%), Positives = 248/329 (75%), Gaps = 5/329 (1%)

Query: 5   LTSLSLAISLSLAG-YAFAASPRNEPVSPILPAQEIHIGKAELGKKLYFDPRLSKSGFIS 63
           LT++++ ++   A  YA AA    EP+  I PA+     K ELGK L+F+PRLSKSGFIS
Sbjct: 4   LTAIAITLTAIFASSYAVAA----EPIEVITPAKITEPEKVELGKMLFFEPRLSKSGFIS 59

Query: 64  CNSCHNLSMGGSDNLKTSIGHNWQQGPINSPTVLNSSLNIAQFWDGRAADLKEQAGGPIA 123
           CNSCHNLS GG D L TSIGH+WQ+GPINSPTVLN+   +AQFWDGRA++LKEQA GPIA
Sbjct: 60  CNSCHNLSTGGVDALPTSIGHHWQEGPINSPTVLNADFMLAQFWDGRASNLKEQAAGPIA 119

Query: 124 NPGEMAFTHTLAIDVLQSIPAYVSEFRLVFGKPTLDIDQVTEAIAEFEKTLVTPYSRFDQ 183
           NP EM FTH LA + + S+PAY + F  V+G   +DID++T+AIA FEKTLVTP S FDQ
Sbjct: 120 NPKEMGFTHELATETIASMPAYRARFAKVYGDEKVDIDRLTDAIAAFEKTLVTPNSPFDQ 179

Query: 184 WLMGDDSAITAQELAGYELFKNSGCVACHNGSALGGNSFQKMGLIEPYQTNNKVEGLSAV 243
           +L+G   AI+    AGY+LFK+ GCV+CHNG A+GG  F KMGLI+P+ TNN  EG   V
Sbjct: 180 YLLGKQDAISGDAKAGYQLFKDKGCVSCHNGPAVGGTMFMKMGLIKPFHTNNPAEGRKGV 239

Query: 244 TGADADRFKFKVPTLRNVALTYPYFHDGEAATLKDAVDIMGRLQLGRKFTDDENGKIVAF 303
           TG DAD+F FKVPTLRN+ LTYPYFHDG   TL++AV+ M  +QLG+K T+ E  ++VAF
Sbjct: 240 TGKDADKFVFKVPTLRNIELTYPYFHDGSVWTLEEAVNTMADIQLGQKLTEKETKEMVAF 299

Query: 304 LHTLTGEQPSFALPILPPSNDNTPKPQPF 332
           L++LTGEQP  +LPILPPSN  TP+P PF
Sbjct: 300 LNSLTGEQPQISLPILPPSNKETPRPVPF 328