Pairwise Alignments

Query, 250 a.a., twin-arginine translocase subunit TatC from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Sec-independent periplasmic protein translocase from Pseudomonas syringae pv. syringae B728a

 Score =  308 bits (789), Expect = 7e-89
 Identities = 149/252 (59%), Positives = 192/252 (76%), Gaps = 6/252 (2%)

Query: 5   EQTQPLISHLLELRNRLLKAVAAVVVIFIGLIYFSNEIYEFVSKPLVERLPAGATMIATD 64
           +Q  PLISHL ELR RLL+ VAAV +IF GL YF+ +IY  VS PL   LP GATMIATD
Sbjct: 9   DQQMPLISHLTELRTRLLRCVAAVFLIFAGLFYFTQKIYTLVSAPLRVYLPEGATMIATD 68

Query: 65  VASPFFTPLKLTLIAAVFLAVPFILYQVWAFVAPGLYKHERRLIFPLLVSSSLLFYCGVA 124
           VASPF TP KLT++ A+FL++P IL+Q+W F+APGLYKHE+R+  PLLVSS +LFY G+A
Sbjct: 69  VASPFITPFKLTMMVALFLSMPVILHQIWGFIAPGLYKHEKRVAVPLLVSSIILFYAGMA 128

Query: 125 FAYFVVFPLVFGFFTAISLGGVEFATDIASYLDFVLALFLAFGIAFEVPVAIILLCWTGA 184
           FAYF+VFPL+F FF +++  GV   TDIASYLDFV+ LF AFG+AFE+PVA++LL W G 
Sbjct: 129 FAYFLVFPLIFHFFASVTPEGVSMMTDIASYLDFVMTLFFAFGVAFEIPVAVVLLVWIGI 188

Query: 185 TTPKSLSEKRPYIIVGAFVVGMLLTPPDMISQTLLAIPMCLLFEVGLFFARFYTR----- 239
              K L + RPY+I+G FVVGM+LTPPD+ SQTLLA+PM LLFE+G+  +    +     
Sbjct: 189 VDVKYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWLLFELGVLCSTMIKKRGEHP 248

Query: 240 -DEADEGQEEEE 250
            DEA++  ++++
Sbjct: 249 DDEAEDADKQDQ 260