Pairwise Alignments

Query, 250 a.a., twin-arginine translocase subunit TatC from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., Sec-independent periplasmic protein translocation protein TatC (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  345 bits (884), Expect = e-100
 Identities = 157/246 (63%), Positives = 211/246 (85%), Gaps = 1/246 (0%)

Query: 4   VEQTQPLISHLLELRNRLLKAVAAVVVIFIGLIYFSNEIYEFVSKPLVERLPAGATMIAT 63
           + Q QPLISHLLELR++LLK++A+V+++FI  +Y++N+IY +++ PL++ LP G +MIAT
Sbjct: 1   MSQQQPLISHLLELRSKLLKSIASVLIVFICSVYWANDIYHYMAIPLMQSLPLGGSMIAT 60

Query: 64  DVASPFFTPLKLTLIAAVFLAVPFILYQVWAFVAPGLYKHERRLIFPLLVSSSLLFYCGV 123
           DVA+PFF P KLTL+ + F+AVP++LYQ+W+FVAPGLYKHE+RL+ PLL SS++LFY G+
Sbjct: 61  DVAAPFFAPFKLTLVLSFFVAVPYVLYQIWSFVAPGLYKHEKRLVMPLLFSSTVLFYLGI 120

Query: 124 AFAYFVVFPLVFGFFTAISLGGVEFATDIASYLDFVLALFLAFGIAFEVPVAIILLCWTG 183
           AFAY++VFP+VFGFF   +  GV+ ATDI+SYLDFVL LF AFG++FE+P+A++LLCW G
Sbjct: 121 AFAYYIVFPVVFGFFANTAPEGVQVATDISSYLDFVLKLFFAFGLSFEIPIAVVLLCWAG 180

Query: 184 ATTPKSLSEKRPYIIVGAFVVGMLLTPPDMISQTLLAIPMCLLFEVGLFFARFYTRDEAD 243
            T+P+ L +KRPYIIVGAFVVGMLLTPPD+ISQT+LA+PM +LFE GLF ARFY++ + D
Sbjct: 181 VTSPEDLKQKRPYIIVGAFVVGMLLTPPDVISQTMLAVPMLILFEAGLFAARFYSKPD-D 239

Query: 244 EGQEEE 249
           E  EEE
Sbjct: 240 ETDEEE 245