Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., 2-polyprenylphenol 6-hydroxylase from Pseudomonas stutzeri RCH2

 Score =  514 bits (1324), Expect = e-150
 Identities = 271/513 (52%), Positives = 360/513 (70%), Gaps = 18/513 (3%)

Query: 4   AELKRLYRIVKVQLEYGLDELLPEHHLTRAPLLARKSLF-----WLRNQHADKALGDRLR 58
           A  +RL+RI+ V + Y LD+++ +  +   P   R + +     W+  + ++ + G RLR
Sbjct: 5   AAARRLFRILLVVIRYRLDDIILDLPM---PWWLRATSYLLPWRWIPRRRSELSRGARLR 61

Query: 59  LALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLE 118
           LAL+ LGP++IKFGQ++STRRDL PP IA+ LAMLQD+V PFD   A  LIE +LGA + 
Sbjct: 62  LALEGLGPIFIKFGQILSTRRDLLPPDIAEELAMLQDRVPPFDSAVATALIERQLGASVG 121

Query: 119 TWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAK 178
             F  FD KPLASAS+AQVH AKL+S G +VV+KV+RP+++P I  D+  ++ +A    +
Sbjct: 122 EIFARFDSKPLASASVAQVHAAKLRS-GEEVVVKVVRPNLKPIISQDLAWLFMLANSAER 180

Query: 179 ALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNET 238
              +ARRL  VEVV +Y KT+ DELDL REAANA QL+RNFE S  LYVP++  D+C   
Sbjct: 181 ISIDARRLHLVEVVDDYAKTIYDELDLLREAANASQLKRNFEGSPLLYVPQIYWDYCRPQ 240

Query: 239 VMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPN 298
           V+V ERIYG+ V+D+AGL    T+M+ LAERGV +FFTQVFRDSFFHADMHPGN+FV+ +
Sbjct: 241 VLVMERIYGVPVTDMAGLARQNTDMRQLAERGVEIFFTQVFRDSFFHADMHPGNIFVSSH 300

Query: 299 HPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEF 358
            P +PQ+I +D GIVG+L  ED+ YLA N +AFF RDYR+VAQLH+DSGWVP +T V+EF
Sbjct: 301 QPWSPQYIAVDFGIVGSLTPEDQDYLARNLMAFFKRDYRKVAQLHIDSGWVPAETKVNEF 360

Query: 359 EVAIRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQL 418
           E AIR VCEPIF KPL +ISFG +L+ LF  ARRFNMEVQPQLVLLQKTLL +EGLGR+L
Sbjct: 361 EAAIRTVCEPIFEKPLKDISFGQLLVRLFQVARRFNMEVQPQLVLLQKTLLNIEGLGREL 420

Query: 419 YPQLDLWQTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSLKQGRNLN 478
           YP LDLW T +P+LE+WM  ++ P+  +  +  +     E++P L  +  + L+  R  +
Sbjct: 421 YPDLDLWSTGQPYLERWMRERMSPKQLIKNVHAQ----IEQLPHLAHMTRELLE--RMSH 474

Query: 479 QRLDNLYQGYRQSKR---QQGTGKFLFGVGATL 508
              +N    +R+  R    +  G  L G GATL
Sbjct: 475 PHANNPPPPWRERHRGWPLRLIGALLLGSGATL 507