Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., ABC1 family protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  162 bits (411), Expect = 2e-44
 Identities = 136/480 (28%), Positives = 224/480 (46%), Gaps = 25/480 (5%)

Query: 55  DRLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELG 114
           D+    L+ LGP ++K GQM+STR D+ PP  A  L  +Q+  +     + +Q+IEEELG
Sbjct: 68  DQFVADLEALGPTFVKLGQMLSTRPDIVPPEFATALERMQENTSSVPVERIRQIIEEELG 127

Query: 115 APLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVAR 174
             +   F  FD  PL  AS+AQVH A L+ +G  V +KV +P++  Q+ +D+ ++   A 
Sbjct: 128 VAVNKAFSHFDPVPLGCASLAQVHRAALR-DGTPVAIKVQKPEVAAQVRSDLDVLKSFAN 186

Query: 175 IVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDF 234
              +     RR++  + + E+ KTL  EL+   EA   ++   + +    L+VP+ + D 
Sbjct: 187 AADRLTGIGRRVRFADWLGEFGKTLRAELNYEAEAETLVRFGEHLKPFPLLWVPQPVWDL 246

Query: 235 CNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVF 294
            +  V+  +   G++V  ++GL      M  LA   V  +  Q+F     HAD HPGN+ 
Sbjct: 247 SSRKVLTMQLAEGVRVDKISGLRRTEQPMDELAAALVKGYLDQMFVHGEIHADPHPGNLR 306

Query: 295 VNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTN 354
           V P    + +    D G+V  +    +  L +   A  +     VA+       + L T 
Sbjct: 307 VMP----DGRLAIFDLGMVAHVPPRLRERLLKLLFAAVDGRGEEVAE-----ETIALSTR 357

Query: 355 VDEF--EVAIRMVCEPIFAKPLCE-ISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYV 411
           ++++  E  +R   + I      +  S G V+L+L   A    +   P+L LL KTLL +
Sbjct: 358 LEDYDEERYLRETGQMIARYAAHDATSEGRVVLDLVRIATATGLRTPPELSLLGKTLLNL 417

Query: 412 EGLGRQLYPQLDLWQTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSL 471
           EG+ R L P LD  +  +  L+  M      +A L      A L  E M EL  LL +  
Sbjct: 418 EGVCRALSPALDTRRIVERHLQHVM------RARLKKSMSAANLASEAM-ELQHLLREGP 470

Query: 472 KQGRNL-----NQRLDNLYQGYRQSKRQQGTGKFLFGVGATLVVCSAIWISNQLEPLAIG 526
           ++  ++       R+     G  +S   +   K    V A +V  + I  S+Q+  +  G
Sbjct: 471 RRMSDILSLVAENRMQMRVTGLEESHLMESLQKIANRVAAGIVTAALIMASSQMMRIETG 530