Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., Ubiquinone biosynthesis monooxygenase UbiB from Xanthomonas campestris pv. campestris strain 8004

 Score =  453 bits (1166), Expect = e-132
 Identities = 255/538 (47%), Positives = 346/538 (64%), Gaps = 11/538 (2%)

Query: 8   RLYRIVKVQLEYGLDELLPEHHLTRAPLLARKSLFWLRNQHADKALGDRLRLALQELGPV 67
           R  RI +V L Y LD LL      R   LA+  +     + A ++ G RLRLALQELGP+
Sbjct: 6   RASRIGRVILRYRLDALLEGTPAERWLRLAKPFVPRASAEIAAQSRGARLRLALQELGPI 65

Query: 68  WIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFDIK 127
           ++KFGQ++STRRDL PP +A+ L +LQD+V PFDG  A+ ++E  LG P+   F  FD  
Sbjct: 66  FVKFGQILSTRRDLIPPDVAEELTLLQDRVKPFDGEAARLIVERALGLPVSVAFAAFDTT 125

Query: 128 PLASASIAQVHTAKLK--SNG--RDVVLKVIRPDIRPQIDADIKLMYRVARIVAKALPEA 183
           PLASASIAQVH A L   +NG  R+VV+KV+RPDI  QIDADI L++ +A +V +  P A
Sbjct: 126 PLASASIAQVHAATLPPDANGLRREVVVKVLRPDIERQIDADIALLHSLATLVERTHPRA 185

Query: 184 RRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSE 243
            +++P EVV E E TL  ELDL+RE ANA  LRR +E S++LYVPEV+     E  +  E
Sbjct: 186 DKIRPREVVAEIEGTLSAELDLQREGANASVLRRFWEGSDDLYVPEVIWSHTAERALTLE 245

Query: 244 RIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVN--PNHPE 301
           R+YGI   D+A L A G + K LA +GV VF+TQVFRD+FFHAD H GN++V+  P    
Sbjct: 246 RVYGIPSDDVAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRL 305

Query: 302 NPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEFEVA 361
           NP++I LD GI+G L+ ED+ YLAENF+A F++DYRR+A+LHV++GW+P +  +DE E A
Sbjct: 306 NPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAA 365

Query: 362 IRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQ 421
            R VCEP F +PL EIS   VL+ LF  A+R+ + +QPQL+LLQKTLL +EG+GRQL P+
Sbjct: 366 ARSVCEPYFTRPLSEISLAEVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPK 425

Query: 422 LDLWQTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSLKQGRNLNQRL 481
           LD+W  A+P LE+ +  +  P+  L  L++R P      P++P L++  LKQ      +L
Sbjct: 426 LDIWAVARPVLERILRERYSPRRVLGELRKRLPEIMTHAPDMPRLVHSWLKQQVEGRHQL 485

Query: 482 DNLYQGYRQ---SKRQQGTGKFLFGVGATLVVCSAIWISNQLEPLAIGSATIGVLCWL 536
           D      R    S R+  T       G+ L+V +A+     L P      T+ V  W+
Sbjct: 486 DIRSSELRALDLSLRKLQTRVVTAITGSGLLVVAAVLYG--LHPDGWYLGTVPVWSWI 541