Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  176 bits (445), Expect = 3e-48
 Identities = 114/389 (29%), Positives = 193/389 (49%), Gaps = 10/389 (2%)

Query: 56  RLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGA 115
           +LR  L ELGP +IK GQ +STR DL PP   + L  LQD++  F    A + IE ELG 
Sbjct: 72  QLRDLLTELGPAFIKVGQALSTRPDLVPPAYLEELTRLQDQLPAFPNAIAFEFIEAELGV 131

Query: 116 PLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARI 175
           P E  F +    P+++AS+ QV+  +L + G +V +KV RP +  +I  D+   Y +  +
Sbjct: 132 PPEAIFAELSDNPVSAASLGQVYRGRLHT-GEEVAVKVQRPGLAERIALDL---YILRGL 187

Query: 176 VAKALPEARRLKP--VEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTD 233
            A A+   RR+K   V +  E+   + +ELD R+EA NA +    +    ++YVP +   
Sbjct: 188 AAWAMRNVRRVKSNLVAIADEFGLRIFEELDYRQEADNAERFAELYGQLPDIYVPSIYRQ 247

Query: 234 FCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNV 293
           + +  V+  E I G ++++L  +   G +   L ERGV     Q+    FFHAD HPGN+
Sbjct: 248 YTSRRVLTMEWIQGTKLTELQAIRNQGIDPAYLIERGVQCSLRQLLEYGFFHADPHPGNL 307

Query: 294 FVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDT 353
              P    + Q   LD G++  +    +  L E  +   NRD++ +A+ +V   ++  DT
Sbjct: 308 LATP----DGQLAYLDFGMMSQVEDYQRYGLIEAVVHLVNRDFQGLARDYVKLEFLTPDT 363

Query: 354 NVDEFEVAIRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEG 413
           ++     A+  V +      + +++F  +   L      +   V     L+ ++L+ +EG
Sbjct: 364 DLTPIIPALAGVFKDAMGASVADLNFKSITDQLSQVMYDYPFRVPAYYALIIRSLVTLEG 423

Query: 414 LGRQLYPQLDLWQTAKPFLEKWMANQVGP 442
           +   + P   +   A PF+ + +     P
Sbjct: 424 IAINVDPNFKVLSKAYPFIARQILTDPSP 452