Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  182 bits (461), Expect = 4e-50
 Identities = 134/488 (27%), Positives = 225/488 (46%), Gaps = 23/488 (4%)

Query: 45  RNQHADKALGDRLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQ 104
           R     + L   +R    +LGP +IK GQ+ STR DLFP    + L+ LQD+V  FD  Q
Sbjct: 71  RQNQRRRKLASWIRETCLDLGPTFIKVGQLFSTRADLFPAEYVEELSKLQDQVPAFDLEQ 130

Query: 105 AKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDA 164
            +Q++  ELGA  E  F DFD  PLA+AS+ QVH A+LK+ G  VV+KV RP ++     
Sbjct: 131 VQQILSNELGASPEELFSDFDPVPLAAASLGQVHRARLKT-GEAVVVKVQRPGLQQLFTV 189

Query: 165 DIKLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEE 224
           D+ ++  +A    +     +    V +  E  + L  E D  RE  NA + RR+F + + 
Sbjct: 190 DLAILRGIAEYFQRHRRWGQGRDWVGIYEECCRILWQETDYLREGRNADRFRRDFRDCDW 249

Query: 225 LYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFF 284
           L VP V   + +  V+  E + GI++SD   L A   + + +++     +  QV    FF
Sbjct: 250 LLVPRVYWRYASPRVLTLEYLPGIKISDYTALEAANLDRQKISQLNAEAYLRQVLNHGFF 309

Query: 285 HADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHV 344
           HAD HPGN+ V+P      + I  D G++G + ++ +  L + FL    +D   +    V
Sbjct: 310 HADPHPGNLAVSP----TGRLIFYDFGMMGEIRTDVRSKLMQVFLGIARKDADDIVSALV 365

Query: 345 DSGWVPLDTNVDEFEVAIRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLL 404
           + G +    ++     +++ + +    +P    S   +  +++  A             +
Sbjct: 366 ELGALLPTGDLGPVRRSVQYLLDNFLDRPFEGQSISAISDDIYEIAYDQPFRFPATFTFV 425

Query: 405 QKTLLYVEGLGRQLYPQLDLWQTAKPFLEKWMANQV-GPQAFLHALKERAPLWFEKMPEL 463
            +    +EG+G+ L P  +    AKP+  + M++    P   L+    +A         L
Sbjct: 426 MRAFSTLEGVGKGLDPDFNFMTVAKPYALEIMSDATPNPAGLLNEFSRQALAVGNSALGL 485

Query: 464 PELLYDSLKQGRNLNQRLDNLYQG-YRQSKRQQGTGKFLFGVGAT------LVVCSAIWI 516
           P          R L+  LD L QG  R   R   + + L  +  T       ++ +A+WI
Sbjct: 486 P----------RRLDDTLDKLEQGDLRVRVRASESDRLLRRLLLTQQSQTWAILTAALWI 535

Query: 517 SNQLEPLA 524
            + +  L+
Sbjct: 536 GSAIVSLS 543