Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  179 bits (453), Expect = 3e-49
 Identities = 125/411 (30%), Positives = 198/411 (48%), Gaps = 10/411 (2%)

Query: 41  LFWLRNQHA-DKALGDR---LRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDK 96
           L W + Q A D  L +R   LR  L  LGP +IK GQ +STR DL      D L  LQD+
Sbjct: 57  LLWDQRQQAGDAHLPERAAELRQILTNLGPTFIKAGQALSTRPDLVRVDFLDELTKLQDQ 116

Query: 97  VAPFDGLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRP 156
           + PF   QA +++ EELG P+   F++   +P+A+AS+ QV+  KL S G  V +KV RP
Sbjct: 117 LPPFPNDQAFEIMAEELGRPVSQSFEELSPEPIAAASLGQVYKGKLFS-GETVAVKVQRP 175

Query: 157 DIRPQIDADIKLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLR 216
           ++ P I  D+ L+   A      LP         +V E+   L +E+D   E  NA +  
Sbjct: 176 NLLPTITLDLFLIRWAATWFGSLLPLNLGHDLTLIVDEFGYKLFEEIDYENEGRNAERFA 235

Query: 217 RNFENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFT 276
            NF +   +  P++   F +  V+  E I G++++  A L   G N   + + GV     
Sbjct: 236 ENFRDCPYVKAPKIYWAFSSRHVLTLEWIDGVKLTAAAELDQLGINADAVVKTGVISGLQ 295

Query: 277 QVFRDSFFHADMHPGNVFVNPNHPENPQWIG----LDCGIVGTLNSEDKRYLAENFLAFF 332
           Q+    FFHAD HPGN+F  P+ P  P  +G    +D G++  L+   K  L +  +   
Sbjct: 296 QLLEFGFFHADPHPGNLFALPSSP-RPDGLGCMAYIDFGMMDQLDQLTKETLVDAVVHLI 354

Query: 333 NRDYRRVAQLHVDSGWVPLDTNVDEFEVAIRMVCEPIFAKPLCEISFGHVLLNLFNTARR 392
           NRDY  +AQ  +  G++  D+++     A+  V   I  + + + +F  +          
Sbjct: 355 NRDYVELAQDFITLGFLTPDSDLTPIIPALESVLGDIMGEKVRDFNFKTITDRFSELMYD 414

Query: 393 FNMEVQPQLVLLQKTLLYVEGLGRQLYPQLDLWQTAKPFLEKWMANQVGPQ 443
           +   V  +  L+ ++L+  EGL   + P   +   A P++ K +     PQ
Sbjct: 415 YPFRVPAKFALIIRSLVTQEGLALSVNPDFRIVDVAYPYIAKRLLQGESPQ 465